RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 CDH18Q13634 790 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 TMEM31Q5JXX7 168 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 ASTLQ6HA08 431 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-213ENST00000546820 CHST9Q7L1S5 443 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 C14orf80Q86SX3 495 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 C12orf40Q86WS4 652 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 FBXL6Q8N531 539 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 PJA1Q8NG27 643 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 IGSF8Q969P0 613 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 PRICKLE1Q96MT3 831 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-213ENST00000546820 DESI2Q9BSY9 194 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 TSGA10Q9BZW7 698 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 FOXQ1Q9C009 403 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 ZYG11BQ9C0D3 744 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 DHX35Q9H5Z1 703 aaKnown RBP14.2□□□□□ -0.14
PTCH1-213ENST00000546820 REXO2Q9Y3B8 237 aaKnown RBP14.2□□□□□ -0.14
PTCH1-213ENST00000546820 ADGRG1Q9Y653 693 aa14.2□□□□□ -0.14
PTCH1-213ENST00000546820 IGLV3-10A0A075B6K4 115 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 SHISA7A6NL88 538 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 I6L893 689 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-213ENST00000546820 DAPK3O43293 454 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 KRT86O43790 486 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 LUC7L3O95232 432 aaKnown RBP14.19□□□□□ -0.14
PTCH1-213ENST00000546820 MOCS3O95396 460 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 KRT7P08729 469 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 CHRNB1P11230 501 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 AOC1P19801 751 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 TARSP26639 723 aaKnown RBP14.19□□□□□ -0.14
PTCH1-213ENST00000546820 SGSHP51688 502 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 KDSRQ06136 332 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 FSTL4Q6MZW2 842 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 RWDD4Q6NW29 188 aaKnown RBP14.19□□□□□ -0.14
PTCH1-213ENST00000546820 CCAR2Q8N163 923 aaKnown RBP14.19□□□□□ -0.14
PTCH1-213ENST00000546820 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 WFIKKN2Q8TEU8 576 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 UCMAQ8WVF2 138 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 TEKT4Q8WW24 435 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 TBC1D31Q96DN5 1066 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 SNRNP25Q9BV90 132 aaKnown RBP14.19□□□□□ -0.14
PTCH1-213ENST00000546820 CATSPERBQ9H7T0 1116 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 ZWILCHQ9H900 591 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 FBRSL1Q9HCM7 1045 aaKnown RBP14.19□□□□□ -0.14
PTCH1-213ENST00000546820 MTF2Q9Y483 593 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-213ENST00000546820 SNX10Q9Y5X0 201 aa14.19□□□□□ -0.14
PTCH1-213ENST00000546820 PRR33A8MZF0 331 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 CREB3O43889 395 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 ATG13O75143 517 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 LRIG2O94898 1065 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 PDGFBP01127 241 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-213ENST00000546820 EGFP01133 1207 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 RHOQP17081 205 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 EPHB2P29323 1055 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 GGCXP38435 758 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 RPS9P46781 194 aaKnown RBP14.18□□□□□ -0.14
PTCH1-213ENST00000546820 HCAR3P49019 387 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 CCZ1BP86790 482 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 CCZ1P86791 482 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-213ENST00000546820 CCINQ13939 588 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 DMC1Q14565 340 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 ODF2Q5BJF6 829 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 ZFYVE27Q5T4F4 411 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 C6orf118Q5T5N4 469 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 RNF43Q68DV7 783 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 ANKS1BQ7Z6G8 1248 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 SETD3Q86TU7 594 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-213ENST00000546820 MAP7D3Q8IWC1 876 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 PYROXD2Q8N2H3 581 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 RNF10Q8N5U6 811 aaKnown RBP14.18□□□□□ -0.14
PTCH1-213ENST00000546820 TERB1Q8NA31 727 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 TPCN2Q8NHX9 752 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 HSPH1Q92598 858 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 CLDN23Q96B33 292 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 MYEOVQ96EZ4 313 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 PEBP4Q96S96 227 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 LACRTQ9GZZ8 138 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 ABCB8Q9NUT2 735 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 GGA2Q9UJY4 613 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 TFR2Q9UP52 801 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 ALG6Q9Y672 507 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 DUSP10Q9Y6W6 482 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 F5P12259 2224 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 COL4A2P08572 1712 aa14.18□□□□□ -0.14
PTCH1-213ENST00000546820 RCCD1A6NED2 376 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 FAM72CH0Y354 149 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 K7EQS6 105 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 EEF2KO00418 725 aaKnown RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 FGF10O15520 208 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 BUB1O43683 1085 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 SPOPO43791 374 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 BUB1BO60566 1050 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 ATP5BP06576 529 aaKnown RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 RARAP10276 462 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 PABPC1P11940 636 aaKnown RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 POLR2EP19388 210 aaKnown RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 IL1R2P27930 398 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 OR1E1P30953 314 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 ARL4AP40617 200 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 TPI1P60174 286 aa14.17□□□□□ -0.14
PTCH1-213ENST00000546820 MRPS21P82921 87 aaKnown RBP14.17□□□□□ -0.14
PTCH1-213ENST00000546820 KRT81Q14533 505 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms