RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 FZD3Q9NPG1 666 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 CHPF2Q9P2E5 772 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 IPO11Q9UI26 975 aaKnown RBP4.72□□□□□ -1.65
CCDC38-204ENST00000546816 PCDHB7Q9Y5E2 793 aa4.72□□□□□ -1.65
CCDC38-204ENST00000546816 PNMA6EA0A0J9YXQ4 647 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 GAS8-AS1O95177 125 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 NTSR2O95665 410 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 MYL3P08590 195 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 EEF1GP26641 437 aaKnown RBP4.71□□□□□ -1.66
CCDC38-204ENST00000546816 TM4SF4P48230 202 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 SLC37A1P57057 533 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 CSHL1Q14406 222 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 TRAPPC11Q7Z392 1133 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 OR52N4Q8NGI2 321 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 MED30Q96HR3 178 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 WDR83Q9BRX9 315 aaKnown RBP4.71□□□□□ -1.66
CCDC38-204ENST00000546816 AAMDCQ9H7C9 122 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 PRDM16Q9HAZ2 1276 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 CD93Q9NPY3 652 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 FBXO28Q9NVF7 368 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 ANAPC4Q9UJX5 808 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 CA14Q9ULX7 337 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 LAMP3Q9UQV4 416 aa4.71□□□□□ -1.66
CCDC38-204ENST00000546816 UBE2J1Q9Y385 318 aaPredicted RBP4.71□□□□□ -1.66
CCDC38-204ENST00000546816 LOC105369274A0A096LPK9 316 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 LOC102723532A0A0G2JNH3 316 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 M0QYT0 321 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 PODXLO00592 558 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 TNFRSF13BO14836 293 aaPredicted RBP4.7□□□□□ -1.66
CCDC38-204ENST00000546816 PCDH17O14917 1159 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 CNTN5O94779 1100 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 GRM4Q14833 912 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 NFATC4Q14934 902 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 ISM2Q6H9L7 571 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 DDIASQ8IXT1 998 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 OR4N4Q8N0Y3 316 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 FAM47BQ8NA70 645 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 OIT3Q8WWZ8 545 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 ZNF566Q969W8 418 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 RIPOR3Q96MK2 946 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 ABHD14AQ9BUJ0 271 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 IL21RQ9HBE5 538 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 SPAG4Q9NPE6 437 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 NECTIN3Q9NQS3 549 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 HELLSQ9NRZ9 838 aa4.7□□□□□ -1.66
CCDC38-204ENST00000546816 RASA4BC9J798 803 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 RASA4O43374 803 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 IGKV3-20P01619 116 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 MLH1P40692 756 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 SHC2P98077 582 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 CBFBQ13951 182 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 RAB30Q15771 203 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 AAK1Q2M2I8 961 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 C6orf10Q5SRN2 563 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 GFI1BQ5VTD9 330 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 FBXO38Q6PIJ6 1188 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 SLC39A5Q6ZMH5 540 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.69□□□□□ -1.66
CCDC38-204ENST00000546816 PAQR4Q8N4S7 273 aaPredicted RBP4.69□□□□□ -1.66
CCDC38-204ENST00000546816 SRFBP1Q8NEF9 429 aaKnown RBP4.69□□□□□ -1.66
CCDC38-204ENST00000546816 WFIKKN2Q8TEU8 576 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 TMEM174Q8WUU8 243 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 KAT2AQ92830 837 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 SLITRK1Q96PX8 696 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 EPS8L2Q9H6S3 715 aa4.69□□□□□ -1.66
CCDC38-204ENST00000546816 A0A087WYN8 130 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 KIF3BO15066 747 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 NKX2-8O15522 239 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 CER1O95813 267 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 ANXA6P08133 673 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 PEPDP12955 493 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 IGFBP2P18065 325 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 TGM2P21980 687 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 EGR4Q05215 589 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 MPEG1Q2M385 716 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 WDR93Q6P2C0 686 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 ADGRF3Q8IZF5 1079 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 OR2C3Q8N628 320 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 PARD3BQ8TEW8 1205 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 INPP5DQ92835 1189 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 C18orf8Q96DM3 657 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 CLMNQ96JQ2 1002 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 FAR2Q96K12 515 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 HTATIP2Q9BUP3 242 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 SF3B5Q9BWJ5 86 aaKnown RBP4.68□□□□□ -1.66
CCDC38-204ENST00000546816 TM7SF3Q9NS93 570 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 FNIP2Q9P278 1114 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 LMTK3Q96Q04 1460 aa4.68□□□□□ -1.66
CCDC38-204ENST00000546816 ANO9A1A5B4 782 aa4.67□□□□□ -1.66
CCDC38-204ENST00000546816 DPPA5A6NC42 116 aa4.67□□□□□ -1.66
CCDC38-204ENST00000546816 PRSS47A8MTI9 375 aa4.67□□□□□ -1.66
CCDC38-204ENST00000546816 H0YGN5 161 aa4.67□□□□□ -1.66
CCDC38-204ENST00000546816 RHODO00212 210 aa4.67□□□□□ -1.66
CCDC38-204ENST00000546816 HNRNPDLO14979 420 aaKnown RBP4.67□□□□□ -1.66
CCDC38-204ENST00000546816 PPM1GO15355 546 aaPredicted RBP4.67□□□□□ -1.66
CCDC38-204ENST00000546816 PLA2G6O60733 806 aa4.67□□□□□ -1.66
CCDC38-204ENST00000546816 GLP2RO95838 553 aa4.67□□□□□ -1.66
CCDC38-204ENST00000546816 IFNA2P01563 188 aa4.67□□□□□ -1.66
CCDC38-204ENST00000546816 CIITAP33076 1130 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms