RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CARNMT1Q8N4J0 409 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 UCMAQ8WVF2 138 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 IGSF8Q969P0 613 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 PACSIN1Q9BY11 444 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 LUC7LQ9NQ29 371 aaKnown RBP17.35■□□□□ 0.37
CCDC38-203ENST00000546803 TMPRSS4Q9NRS4 437 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 KIAA1522Q9P206 1035 aaPredicted RBP17.35■□□□□ 0.37
CCDC38-203ENST00000546803 CTTNBP2NLQ9P2B4 639 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 ANAPC7Q9UJX3 599 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 HCN4Q9Y3Q4 1203 aa17.35■□□□□ 0.37
CCDC38-203ENST00000546803 PRRT4C9JH25 899 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 E9PAM4 449 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 H0Y626 953 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 NPC1O15118 1278 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 PAPSS2O95340 614 aaPredicted RBP17.34■□□□□ 0.37
CCDC38-203ENST00000546803 PABPC1P11940 636 aaKnown RBP17.34■□□□□ 0.37
CCDC38-203ENST00000546803 PCK1P35558 622 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 GGCXP38435 758 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 CXCL12P48061 93 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 CDH4P55283 916 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 SEC13P55735 322 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 DMC1Q14565 340 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 GEN1Q17RS7 908 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 C2orf27AQ580R0 203 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 EFHC2Q5JST6 749 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 SFTPA1Q8IWL2 248 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 AHI1Q8N157 1196 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 CCAR2Q8N163 923 aaKnown RBP17.34■□□□□ 0.37
CCDC38-203ENST00000546803 CCDC185Q8N715 623 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 NIPA2Q8N8Q9 360 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 RPLP0P6Q8NHW5 317 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 ZNF564Q8TBZ8 553 aaPredicted RBP17.34■□□□□ 0.37
CCDC38-203ENST00000546803 PPP1R9BQ96SB3 815 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 BAG1Q99933 345 aaPredicted RBP17.34■□□□□ 0.37
CCDC38-203ENST00000546803 RETREG1Q9H6L5 497 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 ABCB8Q9NUT2 735 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 ELOVL2Q9NXB9 296 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 PPARGC1AQ9UBK2 798 aaKnown RBP17.34■□□□□ 0.37
CCDC38-203ENST00000546803 OR12D3Q9UGF7 316 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 GGA2Q9UJY4 613 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 FBXO4Q9UKT5 387 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 SNX10Q9Y5X0 201 aa17.34■□□□□ 0.37
CCDC38-203ENST00000546803 EPN1Q9Y6I3 576 aaPredicted RBP17.34■□□□□ 0.37
CCDC38-203ENST00000546803 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 EIF3CLB5ME19 914 aaKnown RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 PRPSAP2O60256 369 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 IPO7O95373 1038 aaKnown RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 CHRM1P11229 460 aaPredicted RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 MIPP30301 263 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 L1CAMP32004 1257 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 TIE1P35590 1138 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 MAGEA1P43355 309 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 ZNF177Q13360 481 aaPredicted RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 SLC12A1Q13621 1099 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 EOGTQ5NDL2 527 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 EMC10Q5UCC4 262 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 SYT13Q7L8C5 426 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 PSTKQ8IV42 348 aaKnown RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 RHOT2Q8IXI1 618 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 ARFGAP1Q8N6T3 406 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 ZNF513Q8N8E2 541 aaPredicted RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 WFDC5Q8TCV5 224 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 LMLNQ96KR4 655 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 EIF3CQ99613 913 aaKnown RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 IRF2BPLQ9H1B7 796 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 PRMT8Q9NR22 394 aaPredicted RBP17.33■□□□□ 0.36
CCDC38-203ENST00000546803 FZD10Q9ULW2 581 aa17.33■□□□□ 0.36
CCDC38-203ENST00000546803 SOWAHDA6NJG2 315 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 SRGAP2O75044 1071 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 LRCH4O75427 683 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 NDUFA10O95299 355 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 MOCS3O95396 460 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 ATP5BP06576 529 aaKnown RBP17.32■□□□□ 0.36
CCDC38-203ENST00000546803 HNRNPLP14866 589 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCDC38-203ENST00000546803 CD70P32970 193 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 LMAN2Q12907 356 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 TCEAL1Q15170 157 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 ANGPT1Q15389 498 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 MANEALQ5VSG8 457 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 SDE2Q6IQ49 451 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 PKN3Q6P5Z2 889 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 CIR1Q86X95 450 aaPredicted RBP17.32■□□□□ 0.36
CCDC38-203ENST00000546803 IL17RCQ8NAC3 791 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 RFFLQ8WZ73 363 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 CIPCQ9C0C6 399 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 ZYG11BQ9C0D3 744 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 MMP17Q9ULZ9 603 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 USP18Q9UMW8 372 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 TBC1D30Q9Y2I9 924 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 PCDHA13Q9Y5I0 950 aa17.32■□□□□ 0.36
CCDC38-203ENST00000546803 MTA2O94776 668 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 KLF8O95600 359 aaPredicted RBP17.31■□□□□ 0.36
CCDC38-203ENST00000546803 NTSR1P30989 418 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 HTR7P34969 479 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 SATB1Q01826 763 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 BOLA3Q53S33 107 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 ALFQ53S48 1182 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 FSCBQ5H9T9 825 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 ARTNQ5T4W7 220 aa17.31■□□□□ 0.36
CCDC38-203ENST00000546803 ERMARDQ5T6L9 678 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms