RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 LRMPQ12912 555 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 CNGA2Q16280 664 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 COL28A1Q2UY09 1125 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 C9orf64Q5T6V5 341 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 TCERG1LQ5VWI1 586 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 NUGGCQ68CJ6 796 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 ZNF776Q68DI1 518 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-221ENST00000546229 MMS22LQ6ZRQ5 1243 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 ARHGEF19Q8IW93 802 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 KDM1BQ8NB78 822 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
COPS7A-221ENST00000546229 SNX19Q92543 992 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 KREMEN1Q96MU8 473 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 SLC6A18Q96N87 628 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 BBC3Q96PG8 261 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-221ENST00000546229 GSDMAQ96QA5 445 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 CDC6Q99741 560 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 CCDC86Q9H6F5 360 aaKnown RBP13.04□□□□□ -0.32
COPS7A-221ENST00000546229 SGK2Q9HBY8 427 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 ARMCX3Q9UH62 379 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-221ENST00000546229 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 CYTH4Q9UIA0 394 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 KIAA1257Q9ULG3 409 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 CNTN6Q9UQ52 1028 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 RAXQ9Y2V3 346 aa13.04□□□□□ -0.32
COPS7A-221ENST00000546229 ARID1BQ8NFD5 2236 aaPredicted RBP13.03□□□□□ -0.32
COPS7A-221ENST00000546229 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 A0A1W2PR77 199 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 M0QYV0 167 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 KCNK3O14649 394 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 CTSOP43234 321 aaPredicted RBP13.03□□□□□ -0.32
COPS7A-221ENST00000546229 GRK6P43250 576 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 CCT8P50990 548 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 GALCP54803 685 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 YWHAEP62258 255 aaKnown RBP13.03□□□□□ -0.32
COPS7A-221ENST00000546229 MS4A13Q5J8X5 152 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 KIAA0895LQ68EN5 471 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 C19orf48Q6RUI8 117 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 TMEM270Q6UE05 265 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 KANSL1Q7Z3B3 1105 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 PDZD3Q86UT5 571 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 TAC4Q86UU9 113 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 MFN1Q8IWA4 741 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 AADATQ8N5Z0 425 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 HJURPQ8NCD3 748 aaPredicted RBP13.03□□□□□ -0.32
COPS7A-221ENST00000546229 GOLGA1Q92805 767 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 HSFY1Q96LI6 401 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 FAM129BQ96TA1 746 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 PLA2G4CQ9UP65 541 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 ATMQ13315 3056 aa13.03□□□□□ -0.32
COPS7A-221ENST00000546229 HELZ2Q9BYK8 2649 aaKnown RBP13.03□□□□□ -0.32
COPS7A-221ENST00000546229 A0A1W2PPC4 97 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 VILLO15195 856 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 MID1O15344 667 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 TNFSF14O43557 240 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 FSBPO95073 299 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 DNTTP04053 509 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 ATP5BP06576 529 aaKnown RBP13.02□□□□□ -0.33
COPS7A-221ENST00000546229 GPD2P43304 727 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 TBX4P57082 545 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 RACK1P63244 317 aaKnown RBP13.02□□□□□ -0.33
COPS7A-221ENST00000546229 PITX1P78337 314 aaPredicted RBP13.02□□□□□ -0.33
COPS7A-221ENST00000546229 GCNT1Q02742 428 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 ARID5AQ03989 594 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 ACAP1Q15027 740 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 CST6Q15828 149 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 TTC31Q49AM3 519 aaPredicted RBP13.02□□□□□ -0.33
COPS7A-221ENST00000546229 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 NCEH1Q6PIU2 408 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 FOXR2Q6PJQ5 311 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 BEND5Q7L4P6 421 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 UNC45BQ8IWX7 931 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 RHBDD1Q8TEB9 315 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 PRMT1Q99873 361 aaKnown RBP13.02□□□□□ -0.33
COPS7A-221ENST00000546229 RMND1Q9NWS8 449 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 SCML1Q9UN30 329 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 TLR6Q9Y2C9 796 aa13.02□□□□□ -0.33
COPS7A-221ENST00000546229 GOLGA4Q13439 2230 aaKnown RBP13.02□□□□□ -0.33
COPS7A-221ENST00000546229 MGAQ8IWI9 3026 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 A0A087WV48 116 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 TTC34A8MYJ7 566 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 LATO43561 262 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 FBXO21O94952 628 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 LUC7L3O95232 432 aaKnown RBP13.01□□□□□ -0.33
COPS7A-221ENST00000546229 ASLP04424 464 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 POLR2EP19388 210 aaKnown RBP13.01□□□□□ -0.33
COPS7A-221ENST00000546229 DRD3P35462 400 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 SLC11A2P49281 568 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 METAP1P53582 386 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 ADPRHP54922 357 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 IL9RQ01113 521 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 STILQ15468 1287 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 TEAD4Q15561 434 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 MEA1Q16626 185 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 DCAF6Q58WW2 860 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 SYPL2Q5VXT5 272 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 TRIM59Q8IWR1 403 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms