RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 COPAP53621 1224 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CDH6P55285 790 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 BCAR1P56945 870 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 BST1Q10588 318 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 POU4F2Q12837 409 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CUL3Q13618 768 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CAPSQ13938 189 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 MAP7Q14244 749 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 GRM2Q14416 872 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 KRT81Q14533 505 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CCDC14Q49A88 953 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF394Q53GI3 561 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 EFHC1Q5JVL4 640 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 NOL9Q5SY16 702 aaKnown RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 FAXCQ5TGI0 409 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 LMBRD2Q68DH5 695 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 SNRNP48Q6IEG0 339 aaKnown RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 LLGL2Q6P1M3 1020 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 DENND1BQ6P3S1 775 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 RFWD3Q6PCD5 774 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PGM2L1Q6PCE3 622 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 METTL7BQ6UX53 244 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 RINLQ6ZS11 566 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 RIPOR1Q6ZS17 1223 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ERMP1Q7Z2K6 904 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF438Q7Z4V0 828 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 DHDDSQ86SQ9 333 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PRUNE1Q86TP1 453 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 GALNT12Q8IXK2 581 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ARFGAP1Q8N6T3 406 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PLD5Q8N7P1 536 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 RBM15BQ8NDT2 890 aaKnown RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PPP1R14CQ8TAE6 165 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 RNF217Q8TC41 542 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 FAM172AQ8WUF8 416 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 SEPT1Q8WYJ6 367 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 IRGQQ8WZA9 623 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 TFAP2BQ92481 460 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CNTNAP3BQ96NU0 1288 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ACAP3Q96P50 834 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 FAM118BQ9BPY3 351 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 TCHPQ9BT92 498 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CALN1Q9BXU9 219 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CNTNAP3Q9BZ76 1288 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 MTMR12Q9C0I1 747 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 HAPLN2Q9GZV7 340 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 BRD8Q9H0E9 1235 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CHRDQ9H2X0 955 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 FZD8Q9H461 694 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PDZD7Q9H5P4 517 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ZWILCHQ9H900 591 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 RPF1Q9H9Y2 349 aaKnown RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 MRM3Q9HC36 420 aaKnown RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 S100A14Q9HCY8 104 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PTPRHQ9HD43 1115 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 POLMQ9NP87 494 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ARHGEF4Q9NR80 690 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PICK1Q9NRD5 415 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 KRT82Q9NSB4 513 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ETNK2Q9NVF9 386 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PRMT7Q9NVM4 692 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ETAA1Q9NY74 926 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 MOCS1Q9NZB8 636 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 THEGQ9P2T0 379 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 VPS28Q9UK41 221 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF214Q9UL59 606 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 BARX2Q9UMQ3 279 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 DERAQ9Y315 318 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 C2CD2Q9Y426 696 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PPP2R3BQ9Y5P8 575 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 WDR91A4D1P6 747 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 SLC15A5A6NIM6 579 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ERI2A8K979 691 aaKnown RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 KPNA7A9QM74 516 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 GOLGA8SH3BPF8 625 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 H3BRJ5 948 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 GOLGA8MH3BSY2 632 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 WNT10BO00744 389 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 HGSO14964 777 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 STRNO43815 780 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 OPHN1O60890 802 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 CST3P01034 146 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 PDHA1P08559 390 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 CD19P15391 556 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 TCF4P15884 667 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 PDGFRAP16234 1089 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 L1CAMP32004 1257 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 RGS2P41220 211 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 GPD2P43304 727 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ACADSBP45954 432 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 GJA8P48165 433 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 HARS2P49590 506 aaKnown RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 NUMBP49757 651 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 RAB27AP51159 221 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 STAT5BP51692 787 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 AQP5P55064 265 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 TFAMQ00059 246 aaKnown RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 OVGP1Q12889 678 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 MED21Q13503 144 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 EFTUD2Q15029 972 aaKnown RBP eCLIP6.65□□□□□ -1.343e-44■■■■■ 56.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms