RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 DRGXA6NNA5 263 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 CREB3O43889 395 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 CACNG3O60359 315 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 HOXC13P31276 330 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 SLC1A1P43005 524 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 SLC44A4Q53GD3 710 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 PPP6R3Q5H9R7 873 aaPredicted RBP16.8■□□□□ 0.28
LIMS2-217ENST00000545738 NLRP14Q86W24 1093 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 CPA6Q8N4T0 437 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 FAM71BQ8TC56 605 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 KIAA1524Q8TCG1 905 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 TEKT4Q8WW24 435 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 TSC1Q92574 1164 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 ALG3Q92685 438 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 PCDH18Q9HCL0 1135 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 CWC15Q9P013 229 aaKnown RBP16.8■□□□□ 0.28
LIMS2-217ENST00000545738 CHD5Q8TDI0 1954 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 ATG2BQ96BY7 2078 aa16.8■□□□□ 0.28
LIMS2-217ENST00000545738 SPECC1L-ADORA2AF8WAN1 911 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 PI4K2BG5E9Z4 385 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 ADH1CP00326 375 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 DESP17661 470 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 MPPE1Q53F39 396 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 BOLA3Q53S33 107 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 CXorf57Q6NSI4 855 aaKnown RBP16.79■□□□□ 0.28
LIMS2-217ENST00000545738 POLNQ7Z5Q5 900 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 TFAP2DQ7Z6R9 452 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 TXLNBQ8N3L3 684 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 NETO2Q8NC67 525 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 CSGALNACT1Q8TDX6 532 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 LMLNQ96KR4 655 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 ETNK2Q9NVF9 386 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 LCMT1Q9UIC8 334 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 FBXO10Q9UK96 956 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 NUP205Q92621 2012 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 FANCGO15287 622 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 TULP3O75386 442 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 CISD3P0C7P0 127 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 HLA-FP30511 346 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 PEX5P50542 639 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 ZXDAP98168 799 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 GAD2Q05329 585 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 DPYSL3Q14195 570 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 PSTKQ8IV42 348 aaKnown RBP16.79■□□□□ 0.28
LIMS2-217ENST00000545738 HJURPQ8NCD3 748 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-217ENST00000545738 TMEM51Q9NW97 253 aa16.79■□□□□ 0.28
LIMS2-217ENST00000545738 DDX3YO15523 660 aaKnown RBP16.78■□□□□ 0.28
LIMS2-217ENST00000545738 PDGFBP01127 241 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-217ENST00000545738 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
LIMS2-217ENST00000545738 CDH6P55285 790 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 PFKPQ01813 784 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 DPYSQ14117 519 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 LLGL1Q15334 1064 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 MLF2Q15773 248 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-217ENST00000545738 HADHQ16836 314 aaKnown RBP16.78■□□□□ 0.28
LIMS2-217ENST00000545738 MPP7Q5T2T1 576 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 LRRC38Q5VT99 294 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 DCAF12L1Q5VU92 463 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 TMEM215Q68D42 235 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 RWDD4Q6NW29 188 aaKnown RBP16.78■□□□□ 0.28
LIMS2-217ENST00000545738 AADACL2Q6P093 401 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 TPRG1Q6ZUI0 275 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 TP53INP2Q8IXH6 220 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 RHOT1Q8IXI2 618 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 ZNF687Q8N1G0 1237 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 PKNOX2Q96KN3 472 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 CSPG4P5Q96PW8 444 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 NCAPGQ9BPX3 1015 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 HERPUD2Q9BSE4 406 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 ARHGEF3Q9NR81 526 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 PPARGC1AQ9UBK2 798 aaKnown RBP16.78■□□□□ 0.28
LIMS2-217ENST00000545738 CUL9Q8IWT3 2517 aa16.78■□□□□ 0.28
LIMS2-217ENST00000545738 A0A1B0GVM2 712 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 TCAF2A6NFQ2 919 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 ZSCAN12O43309 604 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 PSTPIP1O43586 416 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 LUC7L3O95232 432 aaKnown RBP16.77■□□□□ 0.28
LIMS2-217ENST00000545738 EPHB2P29323 1055 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 CD70P32970 193 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 KDSRQ06136 332 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 MTA1Q13330 715 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 PON2Q15165 354 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 GEN1Q17RS7 908 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 RFX8Q6ZV50 586 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 UBALD2Q8IYN6 164 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 SIX5Q8N196 739 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 CARNMT1Q8N4J0 409 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 TBC1D31Q96DN5 1066 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 HES6Q96HZ4 224 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 DDX50Q9BQ39 737 aaKnown RBP16.77■□□□□ 0.28
LIMS2-217ENST00000545738 COL25A1Q9BXS0 654 aaPredicted RBP16.77■□□□□ 0.28
LIMS2-217ENST00000545738 ZYG11BQ9C0D3 744 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 KLC2Q9H0B6 622 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 NOL6Q9H6R4 1146 aaKnown RBP16.77■□□□□ 0.28
LIMS2-217ENST00000545738 DNAJC17Q9NVM6 304 aaKnown RBP16.77■□□□□ 0.28
LIMS2-217ENST00000545738 WNT16Q9UBV4 365 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 INTS6Q9UL03 887 aaKnown RBP16.77■□□□□ 0.28
LIMS2-217ENST00000545738 HCN2Q9UL51 889 aa16.77■□□□□ 0.28
LIMS2-217ENST00000545738 MTF2Q9Y483 593 aaPredicted RBP16.77■□□□□ 0.28
LIMS2-217ENST00000545738 MYO18AQ92614 2054 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms