RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 RBM8AQ9Y5S9 174 aaKnown RBP4.29□□□□□ -1.72
LRP6-207ENST00000545658 URB1O60287 2271 aaKnown RBP4.29□□□□□ -1.72
LRP6-207ENST00000545658 ASCC3Q8N3C0 2202 aaKnown RBP4.29□□□□□ -1.72
LRP6-207ENST00000545658 WDR81Q562E7 1941 aa4.29□□□□□ -1.72
LRP6-207ENST00000545658 MTCL1Q9Y4B5 1905 aaKnown RBP4.29□□□□□ -1.72
LRP6-207ENST00000545658 PCNX2A6NKB5 2137 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 WDR27A2RRH5 827 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 GOLGA8BA8MQT2 603 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 SPECC1L-ADORA2AF8WAN1 911 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 DDX39AO00148 427 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 DVL2O14641 736 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 PLD2O14939 933 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 ADAM12O43184 909 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 H2AFYO75367 372 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 FTH1P19P0C7X4 201 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 ENGP17813 658 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 KIF5BP33176 963 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 MCM7P33993 719 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 VIPR2P41587 438 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 MECP2P51608 486 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 ANTXR2P58335 489 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 ROM1Q03395 351 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 HNRNPDQ14103 355 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 PON2Q15165 354 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 ARHGAP44Q17R89 818 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 IFIT1BQ5T764 474 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 SLFN12LQ6IEE8 588 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 SWSAP1Q6NVH7 229 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 ZCCHC8Q6NZY4 707 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 MIS18BP1Q6P0N0 1132 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 TRMT1LQ7Z2T5 733 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 MRPL10Q7Z7H8 261 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 RALGPS2Q86X27 583 aaPredicted RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 MFSD6LQ8IWD5 586 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 HDDC3Q8N4P3 179 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 CAMKK1Q8N5S9 505 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 PNPLA1Q8N8W4 532 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 OR5AN1Q8NGI8 311 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 CACTINQ8WUQ7 758 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 NEU4Q8WWR8 484 aaPredicted RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 PIBF1Q8WXW3 757 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 SMARCD2Q92925 531 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 GCDHQ92947 438 aaPredicted RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 E2F7Q96AV8 911 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 TCEAL4Q96EI5 215 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 CLUHP3Q96NS8 147 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 COLEC11Q9BWP8 271 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 NUSAP1Q9BXS6 441 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 GCOM2Q9BZD3 368 aaPredicted RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 TRIM8Q9BZR9 551 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 PCIF1Q9H4Z3 704 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 PRORYQ9H606 182 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 AGO4Q9HCK5 861 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 HELLSQ9NRZ9 838 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 POLR3BQ9NW08 1133 aaPredicted RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 ADAM28Q9UKQ2 775 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 GIT1Q9Y2X7 761 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 VWA7Q9Y334 891 aa4.28□□□□□ -1.72
LRP6-207ENST00000545658 TNPO3Q9Y5L0 923 aaKnown RBP4.28□□□□□ -1.72
LRP6-207ENST00000545658 EVPLQ92817 2033 aa4.28□□□□□ -1.73
LRP6-207ENST00000545658 NOTCH4Q99466 2003 aa4.28□□□□□ -1.73
LRP6-207ENST00000545658 NBPF19A0A087WUL8 3843 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 SF3B1O75533 1304 aaKnown RBP eCLIP4.27□□□□□ -1.73
LRP6-207ENST00000545658 A0A087WZ62 844 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 ARL5CA6NH57 179 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 HEPACAM2A8MVW5 462 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 CHADO15335 359 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 OPA1O60313 960 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 ATG13O75143 517 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 MAFO75444 373 aaPredicted RBP4.27□□□□□ -1.73
LRP6-207ENST00000545658 PRLP01236 227 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 IGFALSP35858 605 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 MLH1P40692 756 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 CCR2P41597 374 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 SCNN1GP51170 649 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 ADCY7P51828 1080 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 BPIFB4P59827 614 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 DRP2Q13474 957 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 TUBA3CQ13748 450 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 GRM4Q14833 912 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 TRIP6Q15654 476 aaKnown RBP4.27□□□□□ -1.73
LRP6-207ENST00000545658 PSMD5Q16401 504 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 UBE2SQ16763 222 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 PRAMEF9Q5VWM5 478 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 TUBA3EQ6PEY2 450 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 PCSK4Q6UW60 755 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 RTL10Q7L3V2 364 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 CATSPER4Q7RTX7 472 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 C11orf74Q86VG3 221 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 YAF2Q8IY57 180 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 ANKRD53Q8N9V6 530 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 CHST14Q8NCH0 376 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 LNX1Q8TBB1 728 aaPredicted RBP4.27□□□□□ -1.73
LRP6-207ENST00000545658 PIGKQ92643 395 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 RABGGTAQ92696 567 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 GFM2Q969S9 779 aaKnown RBP4.27□□□□□ -1.73
LRP6-207ENST00000545658 SLC7A6OSQ96CW6 309 aaPredicted RBP4.27□□□□□ -1.73
LRP6-207ENST00000545658 FAM167AQ96KS9 214 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 GAD1Q99259 594 aa4.27□□□□□ -1.73
LRP6-207ENST00000545658 FDXACB1Q9BRP7 624 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms