RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 TUSC3Q13454 348 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 NOLC1Q14978 699 aaKnown RBP eCLIP7.19□□□□□ -1.261e-17■■■□□ 17.3
LDHA-223ENST00000545215 NPY5RQ15761 445 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 ARHGAP15Q53QZ3 475 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 PRR16Q569H4 304 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 TPGS2Q68CL5 300 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 MCTP1Q6DN14 999 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 LETMD1Q6P1Q0 360 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 CNNM4Q6P4Q7 775 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 POMZP3Q6PJE2 187 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 LINC00114Q6XXX2 140 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 NEK8Q86SG6 692 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 TMEM130Q8N3G9 435 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 ADCY4Q8NFM4 1077 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 CADM4Q8NFZ8 388 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 BTN2A2Q8WVV5 523 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 ZNF577Q9BSK1 485 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 ASPNQ9BXN1 380 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 TBC1D22BQ9NU19 505 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 CGGBP1Q9UFW8 167 aaPredicted RBP7.19□□□□□ -1.26
LDHA-223ENST00000545215 MTMR6Q9Y217 621 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 GIT1Q9Y2X7 761 aa7.19□□□□□ -1.26
LDHA-223ENST00000545215 TMEM131Q92545 1883 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 LAD1O00515 517 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 DHX15O43143 795 aaKnown RBP7.18□□□□□ -1.26
LDHA-223ENST00000545215 C4BPAP04003 597 aaKnown RBP7.18□□□□□ -1.26
LDHA-223ENST00000545215 PRKCBP05771 671 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 CKMT2P17540 419 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 CIITAP33076 1130 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 OPRD1P41143 372 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 KIR2DL1P43626 348 aaPredicted RBP7.18□□□□□ -1.26
LDHA-223ENST00000545215 AFF3P51826 1226 aaKnown RBP7.18□□□□□ -1.26
LDHA-223ENST00000545215 ZNF445P59923 1031 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 IL9RQ01113 521 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 GUCY1B3Q02153 619 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 EMC10Q5UCC4 262 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 PPP4R3AQ6IN85 833 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 CC2D1AQ6P1N0 951 aaPredicted RBP7.18□□□□□ -1.26
LDHA-223ENST00000545215 PIK3AP1Q6ZUJ8 805 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 ZNF410Q86VK4 478 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 SMAP1Q8IYB5 467 aaPredicted RBP7.18□□□□□ -1.26
LDHA-223ENST00000545215 PPM1KQ8N3J5 372 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 TBCKQ8TEA7 893 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 CRYGNQ8WXF5 182 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 FAM167AQ96KS9 214 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 ZNF396Q96N95 335 aaPredicted RBP7.18□□□□□ -1.26
LDHA-223ENST00000545215 SLC46A2Q9BY10 475 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 CASS4Q9NQ75 786 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 GABBR1Q9UBS5 961 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 CCL26Q9Y258 94 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 HES2Q9Y543 173 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 PCDHA10Q9Y5I2 948 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 FHOD1Q9Y613 1164 aa7.18□□□□□ -1.26
LDHA-223ENST00000545215 MORC2Q9Y6X9 1032 aaPredicted RBP7.18□□□□□ -1.26
LDHA-223ENST00000545215 ANK1P16157 1881 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 COL6A5A8TX70 2615 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 CYP3A7-CYP3A51PA0A087WV96 503 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 TMEM200CA6NKL6 621 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 F8W735 103 aaPredicted RBP7.17□□□□□ -1.26
LDHA-223ENST00000545215 ADAMTS3O15072 1205 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 TBX3O15119 743 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 NOBOXO60393 691 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 SLITRK5O94991 958 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 FGF19O95750 216 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 NCAM1P13591 858 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 CYP3A7P24462 503 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 ACP1P24666 158 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 TKTP29401 623 aaKnown RBP7.17□□□□□ -1.26
LDHA-223ENST00000545215 POLE2P56282 527 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 RESTQ13127 1097 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 DRP2Q13474 957 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 DCAF12L1Q5VU92 463 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 GTF2IRD2BQ6EKJ0 949 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 STRA8Q7Z7C7 330 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 CLEC14AQ86T13 490 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 GTF2IRD2Q86UP8 949 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 GATAD2AQ86YP4 633 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 CMTM8Q8IZV2 173 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 AGGF1Q8N302 714 aaeCLIP7.17□□□□□ -1.26
LDHA-223ENST00000545215 EID2Q8N6I1 236 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 RIN3Q8TB24 985 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 PDCD6IPQ8WUM4 868 aaKnown RBP7.17□□□□□ -1.26
LDHA-223ENST00000545215 RNF141Q8WVD5 230 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 HTR3CQ8WXA8 447 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 PRR11Q96HE9 360 aaPredicted RBP7.17□□□□□ -1.26
LDHA-223ENST00000545215 MIPEPQ99797 713 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 GJB4Q9NTQ9 266 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 EIF2B4Q9UI10 523 aaKnown RBP7.17□□□□□ -1.26
LDHA-223ENST00000545215 CFAP45Q9UL16 551 aa7.17□□□□□ -1.26
LDHA-223ENST00000545215 CSPG4Q6UVK1 2322 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 A0A1B0GTQ1 180 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 A0A1W2PNU3 283 aaPredicted RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 CASTOR2A6NHX0 329 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 CHMP2AO43633 222 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 GAS7O60861 476 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 KCNH1O95259 989 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 BAG4O95429 457 aaKnown RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 CD99P14209 185 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 CD6P30203 668 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 ETV3P41162 512 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms