RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SPEM2Q0P670 501 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 LMAN2Q12907 356 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 OTUD1Q5VV17 481 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-216ENST00000544996 FBXL22Q6P050 247 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 PHLDB2Q86SQ0 1253 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 EMC1Q8N766 993 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 CYB5D2Q8WUJ1 264 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 RLN3Q8WXF3 142 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 ERLEC1Q96DZ1 483 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 MRGPRX1Q96LB2 322 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 CFAP57Q96MR6 1250 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 PPP1R9BQ96SB3 815 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 SELENOOQ9BVL4 669 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 DUSP15Q9H1R2 295 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-216ENST00000544996 CD248Q9HCU0 757 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 AIPL1Q9NZN9 384 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 VANGL2Q9ULK5 521 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 PCDHGA5Q9Y5G8 931 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 HS3ST4Q9Y661 456 aa16.24■□□□□ 0.19
CCDC78-216ENST00000544996 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-216ENST00000544996 ANKRD62A6NC57 917 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 FOXD2O60548 495 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-216ENST00000544996 ASLP04424 464 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 TPM3P06753 285 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 PRKCHP24723 683 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 CSKP41240 450 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 GSCP56915 257 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-216ENST00000544996 ST8SIA6P61647 398 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 ATP11AP98196 1134 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 PTP4A2Q12974 167 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 ZNF177Q13360 481 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-216ENST00000544996 SLC12A1Q13621 1099 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 MAP7D1Q3KQU3 841 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 FUT11Q495W5 492 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 FSCBQ5H9T9 825 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 FIGNQ5HY92 759 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 PITRM1Q5JRX3 1037 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 ACAD10Q6JQN1 1059 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 KIAA1324Q6UXG2 1013 aaKnown RBP16.23■□□□□ 0.19
CCDC78-216ENST00000544996 LRRC31Q6UY01 552 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 LPCAT2Q7L5N7 544 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 CCAR2Q8N163 923 aaKnown RBP16.23■□□□□ 0.19
CCDC78-216ENST00000544996 C3orf20Q8ND61 904 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 RXFP2Q8WXD0 754 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 TTC17Q96AE7 1141 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 LMLNQ96KR4 655 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 ADAM33Q9BZ11 813 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 ARRDC1-AS1Q9H2J1 176 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 TMEM245Q9H330 911 aa16.23■□□□□ 0.19
CCDC78-216ENST00000544996 CLDN11O75508 207 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 EPN2O95208 641 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 BCKDHBP21953 392 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 LMNB2Q03252 620 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 CSRP2Q16527 193 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 PTPRNQ16849 979 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 ARL13BQ3SXY8 428 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 SPDYCQ5MJ68 293 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 RNF219Q5W0B1 726 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-216ENST00000544996 PMS2CLQ68D20 193 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 TRNP1Q6NT89 227 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 DNAJC24Q6P3W2 148 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 SLC36A4Q6YBV0 504 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 MON1BQ7L1V2 547 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 TMPRSS6Q8IU80 811 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 PRCCQ92733 491 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-216ENST00000544996 IGSF8Q969P0 613 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 IQCDQ96DY2 449 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 C1orf74Q96LT6 269 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 HAPLN3Q96S86 360 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 TTYH3Q9C0H2 523 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 TSPY26PQ9H489 355 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 HAUS4Q9H6D7 363 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 PRDM16Q9HAZ2 1276 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 SEMA4GQ9NTN9 838 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 IFNKQ9P0W0 207 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 SUN2Q9UH99 717 aa16.22■□□□□ 0.19
CCDC78-216ENST00000544996 RIF1Q5UIP0 2472 aaKnown RBP16.22■□□□□ 0.19
CCDC78-216ENST00000544996 PTPRZ1P23471 2315 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-216ENST00000544996 A0A1W2PQJ5 194 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 C2CD4BA6NLJ0 364 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 SIGLEC16A6NMB1 481 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 ENDOD1O94919 500 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 ACADMP11310 421 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 HLA-EP13747 358 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 TGM1P22735 817 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 PTPN9P43378 593 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 DHPSP49366 369 aaPredicted RBP16.21■□□□□ 0.19
CCDC78-216ENST00000544996 ATXN1P54253 815 aaKnown RBP16.21■□□□□ 0.19
CCDC78-216ENST00000544996 CDH4P55283 916 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 CREB5Q02930 508 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 SULT2A1Q06520 285 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 KLHL30Q0D2K2 578 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 CDO1Q16878 200 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 PLEKHG6Q3KR16 790 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 CCDC14Q49A88 953 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 BNIPLQ7Z465 357 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 METTL3Q86U44 580 aaKnown RBP16.21■□□□□ 0.19
CCDC78-216ENST00000544996 CIR1Q86X95 450 aaPredicted RBP16.21■□□□□ 0.19
CCDC78-216ENST00000544996 FAM131BQ86XD5 332 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 KDM1BQ8NB78 822 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms