RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TFB1MQ8WVM0 346 aaKnown RBP31.34■■■□□ 2.61
CCM2-219ENST00000544363 RTP4Q96DX8 246 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 SLC22A12Q96S37 553 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 FAM129AQ9BZQ8 928 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 HCFC1R1Q9NWW0 138 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 HCFC2Q9Y5Z7 792 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 IGLV3-10A0A075B6K4 115 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 KCNN4O15554 427 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 ACSL4O60488 711 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 FGF19O95750 216 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 FBXL22Q6P050 247 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 TDHQ8IZJ6 230 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 ART4Q93070 314 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 TLE6Q9H808 572 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 DENND4CQ5VZ89 1909 aa31.33■■■□□ 2.61
CCM2-219ENST00000544363 A0A1W2PRU2 124 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 WASH4PA8MWX3 477 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 PPP1R12AO14974 1030 aaPredicted RBP31.32■■■□□ 2.6
CCM2-219ENST00000544363 NCAM2O15394 837 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 XYLBO75191 536 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 FAM153BP0C7A2 387 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 SLC11A2P49281 568 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 GPS1Q13098 491 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 FAM153CQ494X1 144 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 ELMSAN1Q6PJG2 1045 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 CHSY1Q86X52 802 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 LZTR1Q8N653 840 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 NETO2Q8NC67 525 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 BBOF1Q8ND07 529 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 LRRN4Q8WUT4 740 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 ZFRQ96KR1 1074 aaKnown RBP31.32■■■□□ 2.6
CCM2-219ENST00000544363 KLC2Q9H0B6 622 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 PRDM12Q9H4Q4 367 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 ZDHHC7Q9NXF8 308 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 MPP6Q9NZW5 540 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 FAM153AQ9UHL3 310 aa31.32■■■□□ 2.6
CCM2-219ENST00000544363 EPOPA6NHQ4 379 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 TACR2P21452 398 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 RPL22P35268 128 aaKnown RBP31.31■■■□□ 2.6
CCM2-219ENST00000544363 P3H1Q32P28 736 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 TP53INP2Q8IXH6 220 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 RTL3Q8N8U3 475 aaKnown RBP31.31■■■□□ 2.6
CCM2-219ENST00000544363 FBXO25Q8TCJ0 367 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 CAVIN3Q969G5 261 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 LRRC45Q96CN5 670 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 LGMNQ99538 433 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 ZYG11BQ9C0D3 744 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 ZNF446Q9NWS9 450 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 DNMT3BQ9UBC3 853 aaKnown RBP31.31■■■□□ 2.6
CCM2-219ENST00000544363 GOLGA6L7A0A1B0GV03 622 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 DRGXA6NNA5 263 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 KLKB1P03952 638 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 IRF1P10914 325 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 RHOQP17081 205 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 PFKLP17858 780 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 CORO1AP31146 461 aaKnown RBP31.31■■■□□ 2.6
CCM2-219ENST00000544363 PRKD1Q15139 912 aaPredicted RBP31.31■■■□□ 2.6
CCM2-219ENST00000544363 DENND1CQ8IV53 801 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 MAB21L3Q8N8X9 362 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 SMPD4Q9NXE4 827 aa31.31■■■□□ 2.6
CCM2-219ENST00000544363 NRG2O14511 850 aaPredicted RBP31.3■■■□□ 2.6
CCM2-219ENST00000544363 POU2F2P09086 479 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 MX2P20592 715 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 CCR2P41597 374 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 RBM10P98175 930 aaKnown RBP31.3■■■□□ 2.6
CCM2-219ENST00000544363 GALNT2Q10471 571 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 DUSP6Q16828 381 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 HEATR6Q6AI08 1181 aaKnown RBP31.3■■■□□ 2.6
CCM2-219ENST00000544363 NLRP14Q86W24 1093 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 IGSF8Q969P0 613 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 FMO2Q99518 471 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 BRD8Q9H0E9 1235 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 ATG2AQ2TAZ0 1938 aa31.3■■■□□ 2.6
CCM2-219ENST00000544363 DNALI1O14645 258 aaPredicted RBP31.29■■■□□ 2.6
CCM2-219ENST00000544363 TP73O15350 636 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 GJA1P17302 382 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 ITGA8P53708 1063 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 NRLP54845 237 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 SMAD3P84022 425 aaKnown RBP31.29■■■□□ 2.6
CCM2-219ENST00000544363 CAV1Q03135 178 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 FAM133BQ5BKY9 247 aaKnown RBP31.29■■■□□ 2.6
CCM2-219ENST00000544363 IZUMO3Q5VZ72 239 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 LEMD2Q8NC56 503 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 CCNYQ8ND76 341 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 HTR3CQ8WXA8 447 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 WBP2Q969T9 261 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 GDAP1L1Q96MZ0 367 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 RPRD1AQ96P16 312 aaPredicted RBP31.29■■■□□ 2.6
CCM2-219ENST00000544363 PRKD2Q9BZL6 878 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 DONSONQ9NYP3 566 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 ANAPC5Q9UJX4 755 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 CPQQ9Y646 472 aa31.29■■■□□ 2.6
CCM2-219ENST00000544363 RANBP2P49792 3224 aaKnown RBP31.29■■■□□ 2.6
CCM2-219ENST00000544363 TRAV19A0A0A6YYK7 116 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 F5H5T6 163 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 RHOP08100 348 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 VAV1P15498 845 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 ACTN2P35609 894 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 TNNT3P45378 269 aaPredicted RBP31.28■■■□□ 2.6
CCM2-219ENST00000544363 NRIP1P48552 1158 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms