RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 USP21Q9UK80 565 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 PCDHGC3Q9UN70 934 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 GIPC1O14908 333 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 DHX15O43143 795 aaKnown RBP18.7■□□□□ 0.58
CCT4-204ENST00000544079 HTRA2O43464 458 aaPredicted RBP18.7■□□□□ 0.58
CCT4-204ENST00000544079 ALDH1A2O94788 518 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 ENDOD1O94919 500 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 TOP3BO95985 862 aaKnown RBP18.7■□□□□ 0.58
CCT4-204ENST00000544079 ALDOAP04075 364 aaKnown RBP18.7■□□□□ 0.58
CCT4-204ENST00000544079 TNNI1P19237 187 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 GABRB3P28472 473 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 POLR2BP30876 1174 aaKnown RBP18.7■□□□□ 0.58
CCT4-204ENST00000544079 NRF1Q16656 503 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 SLC9B1Q4ZJI4 515 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 STEAP4Q687X5 459 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 TRMT10BQ6PF06 316 aaKnown RBP18.7■□□□□ 0.58
CCT4-204ENST00000544079 CNTD1Q8N815 330 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 PDPRQ8NCN5 879 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 GRIN3AQ8TCU5 1115 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 HGH1Q9BTY7 390 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 ZNF385DQ9H6B1 395 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 CXorf21Q9HAI6 301 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 SEPT3Q9UH03 358 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 PACSIN3Q9UKS6 424 aa18.7■□□□□ 0.58
CCT4-204ENST00000544079 ZBTB17Q13105 803 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 NHSL2Q5HYW2 709 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 IL23RQ5VWK5 629 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 PTF1AQ7RTS3 328 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 MRPL11Q9Y3B7 192 aaKnown RBP18.69■□□□□ 0.58
CCT4-204ENST00000544079 PCDHAC2Q9Y5I4 1007 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 KPNA4O00629 521 aaPredicted RBP18.69■□□□□ 0.58
CCT4-204ENST00000544079 TPSB2P20231 275 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 SERPINB5P36952 375 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 RHDQ02161 417 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 GALNT2Q10471 571 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 GRSF1Q12849 480 aaKnown RBP eCLIP18.69■□□□□ 0.58
CCT4-204ENST00000544079 TPSAB1Q15661 275 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 KCNT1Q5JUK3 1230 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 PPP4R4Q6NUP7 873 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 RSBN1LQ6PCB5 846 aaPredicted RBP18.69■□□□□ 0.58
CCT4-204ENST00000544079 FRA10AC1Q70Z53 315 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 TTC30AQ86WT1 665 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 TRIM50Q86XT4 487 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 PCYOX1LQ8NBM8 494 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 SREK1Q8WXA9 508 aaKnown RBP18.69■□□□□ 0.58
CCT4-204ENST00000544079 TFAP2CQ92754 450 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 CCDC138Q96M89 665 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 NPLQ9BXD5 320 aaPredicted RBP18.69■□□□□ 0.58
CCT4-204ENST00000544079 NCKIPSDQ9NZQ3 722 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 CDC14AQ9UNH5 594 aa18.69■□□□□ 0.58
CCT4-204ENST00000544079 DDX39AO00148 427 aaKnown RBP18.68■□□□□ 0.58
CCT4-204ENST00000544079 TPP1O14773 563 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 HNRNPDLO14979 420 aaKnown RBP18.68■□□□□ 0.58
CCT4-204ENST00000544079 OXSR1O95747 527 aaPredicted RBP18.68■□□□□ 0.58
CCT4-204ENST00000544079 RFC1P35251 1148 aaPredicted RBP18.68■□□□□ 0.58
CCT4-204ENST00000544079 UBXN2AP68543 259 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 TRAP1Q12931 704 aaKnown RBP18.68■□□□□ 0.58
CCT4-204ENST00000544079 PPIL2Q13356 520 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 EGFLAMQ63HQ2 1017 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 OGFOD2Q6N063 350 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 CDC42EP5Q6NZY7 148 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 ANKFN1Q8N957 763 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 MFSD2AQ8NA29 543 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 SLC4A11Q8NBS3 891 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 RCN3Q96D15 328 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 TUBA1CQ9BQE3 449 aa18.68■□□□□ 0.58
CCT4-204ENST00000544079 UTP6Q9NYH9 597 aaKnown RBP18.68■□□□□ 0.58
CCT4-204ENST00000544079 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
CCT4-204ENST00000544079 BCLAF3A2AJT9 711 aaKnown RBP18.67■□□□□ 0.58
CCT4-204ENST00000544079 CFAP99D6REC4 459 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 H0YCG3 227 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 H7C0C1 242 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 HSPA4LO95757 839 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 KRT3P12035 628 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 PTPN2P17706 415 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 MYF6P23409 242 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 ATP5OP48047 213 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 BMXP51813 675 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 NRLP54845 237 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 PKNOX1P55347 436 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 SLC10A2Q12908 348 aaPredicted RBP18.67■□□□□ 0.58
CCT4-204ENST00000544079 NDUFA5Q16718 116 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 ANKRD26P1Q6NSI1 321 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 MINDY2Q8NBR6 621 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 PSD2Q9BQI7 771 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 C1orf50Q9BV19 199 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 DEFB129Q9H1M3 183 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 NUB1Q9Y5A7 615 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 KAT6AQ92794 2004 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 CNTNAP2Q9UHC6 1331 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 STAMBPO95630 424 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 CYP2C9P11712 490 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 SLC7A1P30825 629 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 CDH15P55291 814 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 NIPAL4Q0D2K0 466 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 ART3Q13508 389 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 NR1D2Q14995 579 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 DNAJC14Q6Y2X3 702 aaPredicted RBP18.67■□□□□ 0.58
CCT4-204ENST00000544079 SLC51AQ86UW1 340 aa18.67■□□□□ 0.58
CCT4-204ENST00000544079 CCDC24Q8N4L8 307 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms