RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 RGS9BPQ6ZS82 235 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 MICALL1Q8N3F8 863 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 TCP10LQ8TDR4 215 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 CCT6BQ92526 530 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 SMOC2Q9H3U7 446 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 ARHGEF38Q9NXL2 777 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 GRID1Q9ULK0 1009 aa17.53■□□□□ 0.4
PTPRO-209ENST00000543886 WDR27A2RRH5 827 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 FAM155BO75949 473 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 SNRPAP09012 282 aaKnown RBP17.52■□□□□ 0.4
PTPRO-209ENST00000543886 GRK4P32298 578 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 GARSP41250 739 aaKnown RBP17.52■□□□□ 0.4
PTPRO-209ENST00000543886 SESN2P58004 480 aaPredicted RBP17.52■□□□□ 0.4
PTPRO-209ENST00000543886 BFSP2Q13515 415 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 ARHGEF6Q15052 776 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 RWDD4Q6NW29 188 aaKnown RBP17.52■□□□□ 0.4
PTPRO-209ENST00000543886 FAM47EQ6ZV65 393 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 DEPDC1BQ8WUY9 529 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 APOPT1Q96IL0 206 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 SERAC1Q96JX3 654 aa17.52■□□□□ 0.4
PTPRO-209ENST00000543886 TRIM56Q9BRZ2 755 aaKnown RBP17.52■□□□□ 0.4
PTPRO-209ENST00000543886 FAM159BA6NKW6 160 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 TRIM49D1C9J1S8 452 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 SYN3O14994 580 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 FSBPO95073 299 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 SRGAP2BP0DMP2 458 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 CCR1P32246 355 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 DNAJC3Q13217 504 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 TRMT10BQ6PF06 316 aaKnown RBP17.52■□□□□ 0.39
PTPRO-209ENST00000543886 CCNJLQ8IV13 435 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 FUBP3Q96I24 572 aaKnown RBP eCLIP17.52■□□□□ 0.39
PTPRO-209ENST00000543886 HAPLN3Q96S86 360 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 PLCD4Q9BRC7 762 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 SIK2Q9H0K1 926 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 SMYD2Q9NRG4 433 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 ARL2BPQ9Y2Y0 163 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 PCDHB7Q9Y5E2 793 aa17.52■□□□□ 0.39
PTPRO-209ENST00000543886 KRT38O76015 456 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 PYGBP11216 843 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 PGAM1P18669 254 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 ADRA1DP25100 572 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 MGAT1P26572 445 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 COG7P83436 770 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 LACTB2Q53H82 288 aaPredicted RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 VARS2Q5ST30 1063 aaKnown RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 STEAP4Q687X5 459 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 ITPRIPL1Q6GPH6 555 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 TRPM8Q7Z2W7 1104 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 APBB2Q92870 758 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 NAT9Q9BTE0 207 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 ELAC1Q9H777 363 aaKnown RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 PIH1D1Q9NWS0 290 aaKnown RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 SFMBT1Q9UHJ3 866 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 TRHDEQ9UKU6 1024 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 MYO18AQ92614 2054 aaKnown RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 A0A1W2PQH9 124 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 MSI1O43347 362 aaKnown RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 CSH1P0DML2 217 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 CSH2P0DML3 217 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 ALADP13716 330 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 GTF2A1P52655 376 aaPredicted RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 CRADDP78560 199 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 SLC18A2Q05940 514 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 ACTN3Q08043 901 aaPredicted RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 EIF4EBP2Q13542 120 aaPredicted RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 CTXN3Q4LDR2 81 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 SCD5Q86SK9 330 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 CEP57Q86XR8 500 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 SPOCK2Q92563 424 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 CASP10Q92851 521 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 MTBPQ96DY7 904 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 VAT1Q99536 393 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 IQCGQ9H095 443 aaKnown RBP17.51■□□□□ 0.39
PTPRO-209ENST00000543886 GBA3Q9H227 469 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 PCDHB5Q9Y5E4 795 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 CAPN7Q9Y6W3 813 aa17.51■□□□□ 0.39
PTPRO-209ENST00000543886 NBNO60934 754 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 FKTNO75072 461 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 HTR7P34969 479 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 SERPINB9P50453 376 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 CYS1Q717R9 158 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 SUGP1Q8IWZ8 645 aaKnown RBP17.5■□□□□ 0.39
PTPRO-209ENST00000543886 NUP93Q8N1F7 819 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 CELF6Q96J87 481 aaKnown RBP17.5■□□□□ 0.39
PTPRO-209ENST00000543886 C8orf48Q96LL4 319 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 AGAP3Q96P47 875 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 FBXO44Q9H4M3 255 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 MOCS1Q9NZB8 636 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 SLC17A7Q9P2U7 560 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 ADAM28Q9UKQ2 775 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 LRFN2Q9ULH4 789 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 PHTF1Q9UMS5 762 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 STARD13Q9Y3M8 1113 aa17.5■□□□□ 0.39
PTPRO-209ENST00000543886 H0YHG0 523 aa17.49■□□□□ 0.39
PTPRO-209ENST00000543886 ENPP3O14638 875 aa17.49■□□□□ 0.39
PTPRO-209ENST00000543886 ZBTB24O43167 697 aaPredicted RBP17.49■□□□□ 0.39
PTPRO-209ENST00000543886 UGT1A9O60656 530 aa17.49■□□□□ 0.39
PTPRO-209ENST00000543886 PAGE1O75459 146 aa17.49■□□□□ 0.39
PTPRO-209ENST00000543886 PGFP49763 221 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms