RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SCARA5Q6ZMJ2 495 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 TMEM26Q6ZUK4 368 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 PCDH20Q8N6Y1 951 aaKnown RBP12.98□□□□□ -0.33
SMG8-202ENST00000543872 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMG8-202ENST00000543872 NPAS2Q99743 824 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 NOL11Q9H8H0 719 aaKnown RBP12.98□□□□□ -0.33
SMG8-202ENST00000543872 SACM1LQ9NTJ5 587 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 PRSS51A0A1B0GVH4 220 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 RGSL1A5PLK6 1076 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 ZNF195O14628 629 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 TRDMT1O14717 391 aaKnown RBP12.98□□□□□ -0.33
SMG8-202ENST00000543872 VNN1O95497 513 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 RBL1P28749 1068 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 TYK2P29597 1187 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 NLRP11P59045 1033 aaKnown RBP12.98□□□□□ -0.33
SMG8-202ENST00000543872 NME3Q13232 169 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 ZACNQ401N2 412 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 FIBCD1Q8N539 461 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 GBA3Q9H227 469 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 DHX33Q9H6R0 707 aaKnown RBP12.98□□□□□ -0.33
SMG8-202ENST00000543872 PNPLA8Q9NP80 782 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 PRPF19Q9UMS4 504 aaKnown RBP12.98□□□□□ -0.33
SMG8-202ENST00000543872 AP4S1Q9Y587 144 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 SQORQ9Y6N5 450 aa12.98□□□□□ -0.33
SMG8-202ENST00000543872 KDM1AO60341 852 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 DPP6P42658 865 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 BMXP51813 675 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 CCDC153Q494R4 210 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 PIGGQ5H8A4 983 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 AARS2Q5JTZ9 985 aaKnown RBP12.97□□□□□ -0.33
SMG8-202ENST00000543872 ZBTB49Q6ZSB9 765 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 VPS51Q9UID3 782 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 PCDHAC2Q9Y5I4 1007 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 DDTLA6NHG4 134 aaPredicted RBP12.97□□□□□ -0.33
SMG8-202ENST00000543872 GLRA3O75311 464 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 MYCLP1P12525 358 aaPredicted RBP12.97□□□□□ -0.33
SMG8-202ENST00000543872 PTPN7P35236 360 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 ACADVLP49748 655 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 LIG4P49917 911 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 SP4Q02446 784 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 SPP2Q13103 211 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 TRIM16LQ309B1 348 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 ZBED5Q49AG3 693 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 LDLRAP1Q5SW96 308 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 TBC1D15Q8TC07 691 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 OSBPL11Q9BXB4 747 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 HIPK3Q9H422 1215 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 VPS45Q9NRW7 570 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 GID8Q9NWU2 228 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 SAC3D1A6NKF1 404 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 ALDOAP04075 364 aaKnown RBP12.97□□□□□ -0.33
SMG8-202ENST00000543872 GNAO1P09471 354 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 ZNF182P17025 639 aaPredicted RBP12.97□□□□□ -0.33
SMG8-202ENST00000543872 GRK2P25098 689 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 SLC25A11Q02978 314 aaKnown RBP12.97□□□□□ -0.33
SMG8-202ENST00000543872 NEDD8Q15843 81 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 CDO1Q16878 200 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 DCPSQ96C86 337 aaKnown RBP12.97□□□□□ -0.33
SMG8-202ENST00000543872 FAM96AQ9H5X1 160 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 CORINQ9Y5Q5 1042 aa12.97□□□□□ -0.33
SMG8-202ENST00000543872 CHADO15335 359 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 CLIC3O95833 236 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 GH2P01242 217 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 IL1R1P14778 569 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 MIPP30301 263 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 ABCG1P45844 678 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 CCR10P46092 362 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 SERPINB9P50453 376 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 SPIDRQ14159 915 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 RGS21Q2M5E4 152 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 KCNT2Q6UVM3 1135 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 CMC1Q7Z7K0 106 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.33
SMG8-202ENST00000543872 ZBTB45Q96K62 511 aaPredicted RBP12.96□□□□□ -0.33
SMG8-202ENST00000543872 MXRA8Q9BRK3 442 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 POLR1BQ9H9Y6 1135 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 POLLQ9UGP5 575 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 A0A087WXM4 84 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 C4BPAP04003 597 aaKnown RBP12.96□□□□□ -0.33
SMG8-202ENST00000543872 SERPINB2P05120 415 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 RCVRNP35243 200 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 TCF7P36402 384 aaPredicted RBP12.96□□□□□ -0.33
SMG8-202ENST00000543872 SNRPFP62306 86 aaKnown RBP12.96□□□□□ -0.33
SMG8-202ENST00000543872 TXNL4AP83876 142 aaKnown RBP12.96□□□□□ -0.33
SMG8-202ENST00000543872 PERM1Q5SV97 790 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 SCYL2Q6P3W7 929 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 DPH6Q7L8W6 267 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 CHST15Q7LFX5 561 aaPredicted RBP12.96□□□□□ -0.33
SMG8-202ENST00000543872 SLC15A4Q8N697 577 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 SAMD3Q8N6K7 520 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 CDH19Q9H159 772 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 EHMT1Q9H9B1 1298 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 PAK5Q9P286 719 aa12.96□□□□□ -0.33
SMG8-202ENST00000543872 COPG2Q9UBF2 871 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms