RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 BCAP29Q9UHQ4 241 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 VPS28Q9UK41 221 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 PAPPA2Q9BXP8 1791 aa14.08□□□□□ -0.15
VPS33A-208ENST00000543633 ARIH2O95376 493 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 TOP3BO95985 862 aaKnown RBP14.08□□□□□ -0.16
VPS33A-208ENST00000543633 MPOP05164 745 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 POLBP06746 335 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 COX4I1P13073 169 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 CPA3P15088 417 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 KCNA4P22459 653 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 ADORA2AP29274 412 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 ADSLP30566 484 aaPredicted RBP14.08□□□□□ -0.16
VPS33A-208ENST00000543633 GRIA1P42261 906 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 ACADSBP45954 432 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 PRKAA2P54646 552 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 TBL3Q12788 808 aaKnown RBP14.08□□□□□ -0.16
VPS33A-208ENST00000543633 SFT2D3Q587I9 215 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 RALGPS1Q5JS13 557 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 CASC4Q6P4E1 433 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 EPGNQ6UW88 154 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 RNF111Q6ZNA4 994 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 DPH6Q7L8W6 267 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 SETD3Q86TU7 594 aaPredicted RBP14.08□□□□□ -0.16
VPS33A-208ENST00000543633 POU5F2Q8N7G0 328 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 COLGALT1Q8NBJ5 622 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 CLMNQ96JQ2 1002 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 CNDP1Q96KN2 507 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 SERPINI1Q99574 410 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 SPATC1LQ9H0A9 340 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 Q9H521 79 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 ADAMTS6Q9UKP5 1117 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 PSMD13Q9UNM6 376 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 COL1A2P08123 1366 aa14.08□□□□□ -0.16
VPS33A-208ENST00000543633 EVPLQ92817 2033 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.07□□□□□ -0.16
VPS33A-208ENST00000543633 PIK3R2O00459 728 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 APOA4P06727 396 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 IQCF3P0C7M6 154 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 VCLP18206 1134 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 SPRP35270 261 aaPredicted RBP14.07□□□□□ -0.16
VPS33A-208ENST00000543633 RPS6KA3P51812 740 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 CHN2P52757 468 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 EPHB1P54762 984 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 CFAP157Q5JU67 520 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 ZFP1Q6P2D0 407 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 USP50Q70EL3 339 aaPredicted RBP14.07□□□□□ -0.16
VPS33A-208ENST00000543633 DEFB107AQ8IZN7 70 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 CERS2Q96G23 380 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 RBBP8Q99708 897 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 PNPOQ9NVS9 261 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 PLK2Q9NYY3 685 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 TRIP11Q15643 1979 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 ADM5C9JUS6 153 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 H3BNX3 289 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 ATP9BO43861 1147 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 MAP3K6O95382 1288 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 SLC25A27O95847 323 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 GJB1P08034 283 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 MGAT1P26572 445 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 PEX2P28328 305 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 TYK2P29597 1187 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 EPHX2P34913 555 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 GRM5P41594 1212 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 LIMK2P53671 638 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 BCAT1P54687 386 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 BST2Q10589 180 aaKnown RBP14.07□□□□□ -0.16
VPS33A-208ENST00000543633 KLF10Q13118 480 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 LSAMPQ13449 338 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 BIRC2Q13490 618 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 PDK1Q15118 436 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 SLC5A9Q2M3M2 681 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 C16orf89Q6UX73 402 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 LCA5Q86VQ0 697 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 MARVELD2Q8N4S9 558 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 LRRC52Q8N7C0 313 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 ICA1LQ8NDH6 482 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 SLC7A14Q8TBB6 771 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 RDH11Q8TC12 318 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 TRAPPC12Q8WVT3 735 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 DCPSQ96C86 337 aaKnown RBP14.07□□□□□ -0.16
VPS33A-208ENST00000543633 SPATA33Q96N06 139 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 DNAI2Q9GZS0 605 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 TMEM216Q9P0N5 145 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 STK39Q9UEW8 545 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 RAD54BQ9Y620 910 aa14.07□□□□□ -0.16
VPS33A-208ENST00000543633 RNF103O00237 685 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 DENRO43583 198 aaKnown RBP14.06□□□□□ -0.16
VPS33A-208ENST00000543633 USP2O75604 605 aaPredicted RBP14.06□□□□□ -0.16
VPS33A-208ENST00000543633 AP1G2O75843 785 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 GABBR2O75899 941 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 THRAP10827 490 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 RAG1P15918 1043 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 GLDCP23378 1020 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 HADHAP40939 763 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 CSE1LP55060 971 aaKnown RBP14.06□□□□□ -0.16
VPS33A-208ENST00000543633 AQP4P55087 323 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 MMEL1Q495T6 779 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 FRMD7Q6ZUT3 714 aa14.06□□□□□ -0.16
VPS33A-208ENST00000543633 CLEC14AQ86T13 490 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms