RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 NUCKS1Q9H1E3 243 aaKnown RBP10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 TMEM245Q9H330 911 aa10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 RETREG1Q9H6L5 497 aa10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 CD248Q9HCU0 757 aa10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 ZDHHC4Q9NPG8 344 aa10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 NLRC4Q9NPP4 1024 aa10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 ITM2CQ9NQX7 267 aa10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 NOCTQ9UK39 431 aaKnown RBP10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 CLEC4EQ9ULY5 219 aa10.63□□□□□ -0.71
NPIPB4-217ENST00000543449 EP300Q09472 2414 aaPredicted RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 GVINP1Q7Z2Y8 2422 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 SYNJ2BP-COX16A0A087WUM0 186 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 IGHV1OR15-9A0A0B4J2B8 117 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 ANKRD62A6NC57 917 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 CLDN11O75508 207 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 GRAP2O75791 330 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 IGLV3-19P01714 112 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 MMEP08473 750 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 C7P10643 843 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 GNSP15586 552 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 BCKDHBP21953 392 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 MMP8P22894 467 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 CD6P30203 668 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 HOXC13P31276 330 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 RDXP35241 583 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 CXCR3P49682 368 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 SULT1E1P49888 294 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 VASPP50552 380 aaPredicted RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 PLK1P53350 603 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 GSCP56915 257 aaPredicted RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 RPS24P62847 133 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 DEUP1Q05D60 604 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 ZNF177Q13360 481 aaPredicted RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 ARID5BQ14865 1188 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 TAF5Q15542 800 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 DUOXA1Q1HG43 343 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 ARL13BQ3SXY8 428 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 NAA35Q5VZE5 725 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 CADM4Q8NFZ8 388 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 RLN3Q8WXF3 142 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 PIGKQ92643 395 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 IQCDQ96DY2 449 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 C1orf74Q96LT6 269 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 RPRD1AQ96P16 312 aaPredicted RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 PRMT1Q99873 361 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 NUP58Q9BVL2 599 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 EDEM3Q9BZQ6 932 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 ARHGEF38Q9NXL2 777 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 COX16Q9P0S2 106 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 USP36Q9P275 1121 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 TPX2Q9ULW0 747 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 INVSQ9Y283 1065 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 NCKAP1Q9Y2A7 1128 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 RAD54BQ9Y620 910 aa10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-217ENST00000543449 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 A0A1W2PQC6 194 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 TARSL2A2RTX5 802 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 ANTXRLA6NF34 631 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 WASH3PC4AMC7 463 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 DNTTP04053 509 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 PRKCHP24723 683 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 SDC4P31431 198 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 CD70P32970 193 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 CSKP41240 450 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 SGSHP51688 502 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 CDH4P55283 916 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 RNASE9P60153 205 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 ECT2LQ008S8 904 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 FMO1Q01740 532 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 CENPCQ03188 943 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 ZNF33AQ06730 810 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 AUHQ13825 339 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 PLEKHG6Q3KR16 790 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 C5orf22Q49AR2 442 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 PITRM1Q5JRX3 1037 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 DAB2IPQ5VWQ8 1189 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 PEAR1Q5VY43 1037 aaPredicted RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 TMEM215Q68D42 235 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 ZNF776Q68DI1 518 aaPredicted RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 TMEFF1Q8IYR6 380 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 CCAR2Q8N163 923 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 CPA5Q8WXQ8 436 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 P2RY11Q96G91 374 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 ZNF419Q96HQ0 510 aaPredicted RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 LMLNQ96KR4 655 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 HAPLN3Q96S86 360 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 RTN4Q9NQC3 1192 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 MBD1Q9UIS9 605 aaPredicted RBP10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 CYP8B1Q9UNU6 501 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 WDFY4Q6ZS81 3184 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 GPR179Q6PRD1 2367 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 SPAG17Q6Q759 2223 aa10.61□□□□□ -0.71
NPIPB4-217ENST00000543449 ITIH6Q6UXX5 1313 aa10.6□□□□□ -0.71
NPIPB4-217ENST00000543449 EDDM13A0A1B0GTR0 161 aa10.6□□□□□ -0.71
NPIPB4-217ENST00000543449 GOLGA6L19H0YKK7 550 aa10.6□□□□□ -0.71
NPIPB4-217ENST00000543449 GOLGA8SH3BPF8 625 aa10.6□□□□□ -0.71
NPIPB4-217ENST00000543449 PAGE1O75459 146 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms