RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 GRID2O43424 1007 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 PEX11BO96011 259 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 ALDH18A1P54886 795 aaKnown RBP10.9□□□□□ -0.66
CALU-206ENST00000542996 THOC5Q13769 683 aaKnown RBP10.9□□□□□ -0.66
CALU-206ENST00000542996 PIGZQ86VD9 579 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 DEFB106AQ8N104 65 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 GPC2Q8N158 579 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 ATP11CQ8NB49 1132 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 NOL6Q9H6R4 1146 aaKnown RBP10.9□□□□□ -0.66
CALU-206ENST00000542996 HCSTQ9UBK5 93 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 TNRC18O15417 2968 aaPredicted RBP10.9□□□□□ -0.66
CALU-206ENST00000542996 H3BRB1 525 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 CCL22O00626 93 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 PLIN3O60664 434 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 PSMG1O95456 288 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 PRSS56P0CW18 603 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 EPHX2P34913 555 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 INHBCP55103 352 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 YWHAGP61981 247 aaKnown RBP eCLIP10.9□□□□□ -0.66
CALU-206ENST00000542996 BEX3Q00994 111 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 MXD4Q14582 209 aaPredicted RBP10.9□□□□□ -0.66
CALU-206ENST00000542996 CRYMQ14894 314 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 LRRC36Q1X8D7 754 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 IL31Q6EBC2 164 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 PACS1Q6VY07 963 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 NDUFAF2Q8N183 169 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 RIBC1Q8N443 379 aaPredicted RBP10.9□□□□□ -0.66
CALU-206ENST00000542996 SCAMP5Q8TAC9 235 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 LRRC8CQ8TDW0 803 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 KIF12Q96FN5 646 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 QKIQ96PU8 341 aaKnown RBP eCLIP10.9□□□□□ -0.665e-8■■■■■ 65.2
CALU-206ENST00000542996 TUT1Q9H6E5 874 aaKnown RBP10.9□□□□□ -0.66
CALU-206ENST00000542996 SIN3BO75182 1162 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 ZWINTO95229 277 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 PGK1P00558 417 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 MMP3P08254 477 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 NMBRP28336 390 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 CA5AP35218 305 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 GCKP35557 465 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 LILRA4P59901 499 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 TRAF1Q13077 416 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 ACAP2Q15057 778 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 ZFYVE27Q5T4F4 411 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 FSTL4Q6MZW2 842 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 SLC26A11Q86WA9 606 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 NPY6RQ99463 290 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 NUDT5Q9UKK9 219 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 SMG5Q9UPR3 1016 aaKnown RBP10.9□□□□□ -0.66
CALU-206ENST00000542996 PTGDR2Q9Y5Y4 395 aa10.9□□□□□ -0.66
CALU-206ENST00000542996 SYNJ2BP-COX16A0A087WUM0 186 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 MDM4O15151 490 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 IL1BP01584 269 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 ATP6V1C1P21283 382 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 CHRNA4P43681 627 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 EFNA5P52803 228 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 SESN2P58004 480 aaPredicted RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 PTPRCAPQ14761 206 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 TMEM132DQ14C87 1099 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 DENND6AQ8IWF6 608 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 PKMYT1Q99640 499 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 RPF1Q9H9Y2 349 aaKnown RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 XPNPEP3Q9NQH7 507 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 COX16Q9P0S2 106 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 SMIM18P0DKX4 95 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 VDRP11473 427 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 ITGAXP20702 1163 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 RAP1GDS1P52306 607 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 CDKL1Q00532 357 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 ADIGQ0VDE8 80 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 LDLRAD1Q5T700 205 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 N4BP2L1Q5TBK1 243 aaPredicted RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 FAM91A1Q658Y4 838 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 PPP1R21Q6ZMI0 780 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 CCDC91Q7Z6B0 441 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 KLHDC9Q8NEP7 349 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 SPDL1Q96EA4 605 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 KLHL32Q96NJ5 620 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 AGAP3Q96P47 875 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 DDX56Q9NY93 547 aaKnown RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 NUP214P35658 2090 aaPredicted RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 GRIK4Q16099 956 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 CDHR1Q96JP9 859 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 DHX35Q9H5Z1 703 aaKnown RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 ZDHHC2Q9UIJ5 367 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 AP4E1Q9UPM8 1137 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 PRRC2BQ5JSZ5 2229 aaKnown RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 PLOD2O00469 737 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 DLGAP1O14490 977 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 C1QCP02747 245 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 PEX2P28328 305 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 TRPC3Q13507 836 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 PPP1R3AQ16821 1122 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 FASTKD1Q53R41 847 aaKnown RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 VOPP1Q96AW1 172 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 ZNF512Q96ME7 567 aaPredicted RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 APOL6Q9BWW8 343 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 AGO3Q9H9G7 860 aaKnown RBP10.89□□□□□ -0.67
CALU-206ENST00000542996 NKIRAS1Q9NYS0 192 aa10.89□□□□□ -0.67
CALU-206ENST00000542996 DCHS1Q96JQ0 3298 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms