RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SYT15Q9BQS2 421 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 MED10Q9BTT4 135 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CADM1Q9BY67 442 aaKnown RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ULBP1Q9BZM6 244 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 TSPYL2Q9H2G4 693 aaPredicted RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CRTAC1Q9NQ79 661 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 XPNPEP3Q9NQH7 507 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 FBXO6Q9NRD1 293 aaPredicted RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 THAP1Q9NVV9 213 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CUEDC1Q9NWM3 386 aaPredicted RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ADAM28Q9UKQ2 775 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CLEC11AQ9Y240 323 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 COMMD10Q9Y6G5 202 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 FAM237BA0A1B0GVD1 139 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CAPN14A8MX76 684 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 AP2A1O95782 977 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 GSRP00390 522 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 TPBGLP0DKB5 382 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 GM2AP17900 193 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ERCC2P18074 760 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 GNAZP19086 355 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 MX2P20592 715 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 PTPN3P26045 913 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 GP5P40197 560 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 GARSP41250 739 aaKnown RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 MAGEA12P43365 314 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 NDUFV1P49821 464 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 MAP3K7CLP57077 242 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 SESN2P58004 480 aaPredicted RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 MRPS6P82932 125 aaKnown RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 PURAQ00577 322 aaKnown RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CMPK2Q5EBM0 449 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CES4AQ5XG92 561 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 C4orf50Q6ZRC1 276 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ARID3BQ8IVW6 561 aaPredicted RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 C2orf69Q8N8R5 385 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 RNF169Q8NCN4 708 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 GSTCDQ8NEC7 633 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 PPP1R13LQ8WUF5 828 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 IRGQQ8WZA9 623 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 HDAC11Q96DB2 347 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 PGBD4Q96DM1 585 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CERS2Q96G23 380 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 MYCBPQ99417 103 aaPredicted RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CPNE1Q99829 537 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 NMUR2Q9GZQ4 415 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 FAM96AQ9H5X1 160 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 DENND2DQ9H6A0 471 aaPredicted RBP6.72□□□□□ -1.33
PTPRO-208ENST00000542557 LRRC40Q9H9A6 602 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 SYBUQ9NX95 663 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 DCDC2Q9UHG0 476 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 FBXW11Q9UKB1 542 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 CDH9Q9ULB4 789 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 SORCS3Q9UPU3 1222 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 TRPV2Q9Y5S1 764 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 NR2E3Q9Y5X4 410 aa6.72□□□□□ -1.33
PTPRO-208ENST00000542557 ZNF638Q14966 1978 aaKnown RBP6.71□□□□□ -1.33
PTPRO-208ENST00000542557 TRPM7Q96QT4 1865 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 hCG_2014768A0A024R1R8 64 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 TTC36A6NLP5 189 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 TPP1O14773 563 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 NRP1O14786 923 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 CAPN9O14815 690 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 GSC2O15499 205 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 PLIN3O60664 434 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 KPNA6O60684 536 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 DIAPH2O60879 1101 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 AP1G2O75843 785 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 F9P00740 461 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 ITGA2BP08514 1039 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 RARBP10826 455 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 ESRRAP11474 423 aaPredicted RBP6.71□□□□□ -1.33
PTPRO-208ENST00000542557 TPI1P60174 286 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 NME3Q13232 169 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 STX3Q13277 289 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 FSCN1Q16658 493 aaKnown RBP6.71□□□□□ -1.33
PTPRO-208ENST00000542557 ARL13BQ3SXY8 428 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 HSF5Q4G112 596 aaPredicted RBP6.71□□□□□ -1.33
PTPRO-208ENST00000542557 GRTP1Q5TC63 336 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 MBLAC2Q68D91 279 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 HFE2Q6ZVN8 426 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 SCML4Q8N228 414 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 ARHGAP24Q8N264 748 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 MAB21L3Q8N8X9 362 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 CCNYQ8ND76 341 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 ZMIZ2Q8NF64 920 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 SLC7A14Q8TBB6 771 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 SMARCD1Q96GM5 515 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 PRR11Q96HE9 360 aaPredicted RBP6.71□□□□□ -1.33
PTPRO-208ENST00000542557 ZFP42Q96MM3 310 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 VAT1Q99536 393 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 SMOQ99835 787 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 GBA3Q9H227 469 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 CSNK1G1Q9HCP0 422 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 CASS4Q9NQ75 786 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 CHST12Q9NRB3 414 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 TMPRSS4Q9NRS4 437 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 FAM105AQ9NUU6 356 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 CPA4Q9UI42 421 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 TRHDEQ9UKU6 1024 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms