RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 RNF25Q96BH1 459 aaPredicted RBP23.83■■□□□ 1.41
HOMER3-205ENST00000542541 CATSPERBQ9H7T0 1116 aa23.83■■□□□ 1.41
HOMER3-205ENST00000542541 ECT2Q9H8V3 914 aa23.83■■□□□ 1.41
HOMER3-205ENST00000542541 CWC15Q9P013 229 aaKnown RBP23.83■■□□□ 1.41
HOMER3-205ENST00000542541 MARK1Q9P0L2 795 aa23.83■■□□□ 1.41
HOMER3-205ENST00000542541 PI4K2BG5E9Z4 385 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 KIF2AO00139 706 aaPredicted RBP23.82■■□□□ 1.4
HOMER3-205ENST00000542541 ENC1O14682 589 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 FGF10O15520 208 aaPredicted RBP23.82■■□□□ 1.4
HOMER3-205ENST00000542541 ASGR2P07307 311 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 ARSAP15289 507 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 GOT1P17174 413 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 ANO4Q32M45 955 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 CCDC50Q8IVM0 306 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 CCDC117Q8IWD4 279 aaPredicted RBP23.82■■□□□ 1.4
HOMER3-205ENST00000542541 TSC1Q92574 1164 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 PRICKLE1Q96MT3 831 aaPredicted RBP23.82■■□□□ 1.4
HOMER3-205ENST00000542541 WDR24Q96S15 920 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 BBS2Q9BXC9 721 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 MAK16Q9BXY0 300 aaKnown RBP23.82■■□□□ 1.4
HOMER3-205ENST00000542541 TRPV5Q9NQA5 729 aa23.82■■□□□ 1.4
HOMER3-205ENST00000542541 CTAGE9A4FU28 777 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CLDN11O75508 207 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CYP17A1P05093 508 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 HOXC13P31276 330 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 RPS24P62847 133 aaKnown RBP23.81■■□□□ 1.4
HOMER3-205ENST00000542541 ITPRIPL2Q3MIP1 535 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CFAP52Q8N1V2 620 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CSGALNACT1Q8TDX6 532 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 C16orf45Q96MC5 204 aaPredicted RBP23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CSPG4P5Q96PW8 444 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 NAPGQ99747 312 aaPredicted RBP23.81■■□□□ 1.4
HOMER3-205ENST00000542541 PRDM16Q9HAZ2 1276 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 TCF20Q9UGU0 1960 aaKnown RBP23.81■■□□□ 1.4
HOMER3-205ENST00000542541 A0A1B0GVM2 712 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 TCAF2A6NFQ2 919 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 C3orf70A6NLC5 250 aaPredicted RBP23.81■■□□□ 1.4
HOMER3-205ENST00000542541 KCNK3O14649 394 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 TBL1XO60907 577 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CD48P09326 243 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 ADH5P11766 374 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 RHOQP17081 205 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CDH4P55283 916 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 PFKPQ01813 784 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CHST9Q7L1S5 443 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 ZNF557Q8N988 423 aaPredicted RBP23.81■■□□□ 1.4
HOMER3-205ENST00000542541 CARD9Q9H257 536 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 HPS4Q9NQG7 708 aa23.81■■□□□ 1.4
HOMER3-205ENST00000542541 NEDD8-MDP1E9PL57 170 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 HOXC11O43248 304 aaPredicted RBP23.8■■□□□ 1.4
HOMER3-205ENST00000542541 PENKP01210 267 aaPredicted RBP23.8■■□□□ 1.4
HOMER3-205ENST00000542541 IL4RP24394 825 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 AMPD2Q01433 879 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 TNK2Q07912 1038 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 ANKRD20A8PQ5CZ79 823 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 TFDP3Q5H9I0 405 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 FYB2Q5VWT5 728 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 MFSD7Q6UXD7 560 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 SPOCD1Q6ZMY3 1216 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 DNASE1L2Q92874 299 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 BHMTQ93088 406 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 MYEOVQ96EZ4 313 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 MPP6Q9NZW5 540 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 DNAI1Q9UI46 699 aa23.8■■□□□ 1.4
HOMER3-205ENST00000542541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.79■■□□□ 1.4
HOMER3-205ENST00000542541 ARNTLO00327 626 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 ATP1A1P05023 1023 aaKnown RBP23.79■■□□□ 1.4
HOMER3-205ENST00000542541 PYGMP11217 842 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 TYRP14679 529 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 CASQ1P31415 396 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 CDKN2BP42772 138 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 ZNF177Q13360 481 aaPredicted RBP23.79■■□□□ 1.4
HOMER3-205ENST00000542541 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.79■■□□□ 1.4
HOMER3-205ENST00000542541 FAF2Q96CS3 445 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 RNF157Q96PX1 679 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 XPO6Q96QU8 1125 aaKnown RBP23.79■■□□□ 1.4
HOMER3-205ENST00000542541 GTSE1Q9NYZ3 720 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 EFR3BQ9Y2G0 817 aa23.79■■□□□ 1.4
HOMER3-205ENST00000542541 SRFP11831 508 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 HOXD9P28356 352 aaPredicted RBP23.78■■□□□ 1.4
HOMER3-205ENST00000542541 SGSHP51688 502 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 MMRN1Q13201 1228 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 DPYSQ14117 519 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 TFDP2Q14188 446 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 PPP2R5EQ16537 467 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 TAZQ16635 292 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 ALFQ53S48 1182 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 ARTNQ5T4W7 220 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 SEL1L2Q5TEA6 688 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 SYT10Q6XYQ8 523 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 SLC2A11Q9BYW1 496 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 ARHGEF4Q9NR80 690 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 TMEM248Q9NWD8 314 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 PLK2Q9NYY3 685 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 SORCS3Q9UPU3 1222 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 NEU3Q9UQ49 428 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 VCANP13611 3396 aa23.78■■□□□ 1.4
HOMER3-205ENST00000542541 WASH4PA8MWX3 477 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 H0Y626 953 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 CNTN5O94779 1100 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms