RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 C2CD6Q53TS8 623 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PPP1R21Q6ZMI0 780 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MARK2Q7KZI7 788 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PASD1Q8IV76 773 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 NAT14Q8WUY8 206 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 BCL7CQ8WUZ0 217 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TFAP2BQ92481 460 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PWWP2AQ96N64 755 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 CATSPER2Q96P56 530 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MOGAT1Q96PD6 335 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 MIS12Q9H081 205 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 ASIC3Q9UHC3 531 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 PCNTO95613 3336 aa8.22□□□□□ -1.09
PDLIM5-221ENST00000542407 TRAV6A0A075B6T7 132 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 GOLGA8MH3BSY2 632 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 PODXLO00592 558 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 ENPP3O14638 875 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 HDAC3O15379 428 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 PHF2O75151 1096 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 S100A6P06703 90 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 WEE2P0C1S8 567 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 ATF7P17544 494 aaPredicted RBP8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 HNF1BP35680 557 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 PTGIRP43119 386 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 GALK1P51570 392 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 WDR4P57081 412 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 BEX3Q00994 111 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 HSPA14Q0VDF9 509 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 TRPC3Q13507 836 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 INSCQ1MX18 579 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 PLEKHA7Q6IQ23 1121 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 RTL10Q7L3V2 364 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 SATL1Q86VE3 508 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 LRRTM3Q86VH5 581 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 ZDHHC14Q8IZN3 488 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 WDTC1Q8N5D0 677 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 LSMEM1Q8N8F7 131 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 PRELID2Q8N945 189 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 CEP70Q8NHQ1 597 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 VCPIP1Q96JH7 1222 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 ACAP3Q96P50 834 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 HGH1Q9BTY7 390 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 WNT8AQ9H1J5 351 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 ZFYVE28Q9HCC9 887 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 NAALADL1Q9UQQ1 740 aa8.21□□□□□ -1.09
PDLIM5-221ENST00000542407 A0A0G2JND7 137 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 MYADML2A6NDP7 307 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 CCDC22O60826 627 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 OLFM2O95897 454 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 ITGB3P05106 788 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 CD58P19256 250 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 CHRNA3P32297 505 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 NSFP46459 744 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 RAP1GAPP47736 663 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 CPA2P48052 419 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 CPT1AP50416 773 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 DRG2P55039 364 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 ZNF200P98182 395 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 CAP1Q01518 475 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 C1QBPQ07021 282 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 OVGP1Q12889 678 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 SCARA5Q6ZMJ2 495 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 NXPE3Q969Y0 559 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 OLFM3Q96PB7 478 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 MRPL9Q9BYD2 267 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 ARHGAP39Q9C0H5 1083 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 FAM49AQ9H0Q0 323 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 TRPV6Q9H1D0 765 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 SCPEP1Q9HB40 452 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 TRPC7Q9HCX4 862 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 GIT1Q9Y2X7 761 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 STARD13Q9Y3M8 1113 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 PCDHA3Q9Y5H8 950 aa8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 PDCD11Q14690 1871 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-221ENST00000542407 TCRBV7S2A1N4TA0A589 114 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 KRBA1A5PL33 1030 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 FAM47DPA6NHR8 397 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 TXNDC9O14530 226 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 LSM8O95777 96 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 STAU1O95793 577 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 SLC4A1P02730 911 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 S100BP04271 92 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 CYBAP13498 195 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 DARSP14868 501 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 PRKACAP17612 351 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 MMP8P22894 467 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 SERPINB6P35237 376 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 THOP1P52888 689 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 ADARP55265 1226 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 PURAQ00577 322 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 DSG1Q02413 1049 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 MAMLD1Q13495 774 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 PKN2Q16513 984 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 DCAF4L1Q3SXM0 396 aa8.2□□□□□ -1.1
PDLIM5-221ENST00000542407 PDCD4Q53EL6 469 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms