RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 MS4A7Q9GZW8 240 aaPredicted RBP9.21□□□□□ -0.94
MRPS35-204ENST00000542199 UPF3AQ9H1J1 476 aaKnown RBP9.21□□□□□ -0.94
MRPS35-204ENST00000542199 RANBP17Q9H2T7 1088 aaKnown RBP9.21□□□□□ -0.94
MRPS35-204ENST00000542199 ZNF703Q9H7S9 590 aaPredicted RBP9.21□□□□□ -0.94
MRPS35-204ENST00000542199 PARPBPQ9NWS1 579 aa9.21□□□□□ -0.94
MRPS35-204ENST00000542199 CYP39A1Q9NYL5 469 aa9.21□□□□□ -0.94
MRPS35-204ENST00000542199 TAGLN3Q9UI15 199 aa9.21□□□□□ -0.94
MRPS35-204ENST00000542199 DAAM1Q9Y4D1 1078 aa9.21□□□□□ -0.94
MRPS35-204ENST00000542199 TRANK1O15050 2925 aa9.21□□□□□ -0.94
MRPS35-204ENST00000542199 MYADML2A6NDP7 307 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 MYO1CO00159 1063 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 KIAA0355O15063 1070 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 CTAGE5O15320 804 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 CLTBP09497 229 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 PDHBP11177 359 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 SNAP25P60880 206 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 CCDC96Q2M329 555 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 SPATS1Q496A3 300 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 CD300EQ496F6 205 aaPredicted RBP9.2□□□□□ -0.94
MRPS35-204ENST00000542199 LONRF3Q496Y0 759 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 SLC44A4Q53GD3 710 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 CCDC174Q6PII3 467 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 MFSD6Q6ZSS7 791 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 TMPRSS9Q7Z410 1059 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 DEFB123Q8N688 67 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 CPEB3Q8NE35 698 aaKnown RBP9.2□□□□□ -0.94
MRPS35-204ENST00000542199 TMEM125Q96AQ2 219 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 TTC14Q96N46 770 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 ALOXE3Q9BYJ1 711 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 RNF41Q9H4P4 317 aaPredicted RBP9.2□□□□□ -0.94
MRPS35-204ENST00000542199 NLRC4Q9NPP4 1024 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 NEDD4P46934 1319 aa9.2□□□□□ -0.94
MRPS35-204ENST00000542199 PLXNA1Q9UIW2 1896 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 GAGE12BA1L429 117 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 ASB14A6NK59 587 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 HIP1O00291 1037 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 FOXN3O00409 490 aaPredicted RBP9.19□□□□□ -0.94
MRPS35-204ENST00000542199 ITGB8P26012 769 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 SLC16A2P36021 539 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 HTR3AP46098 478 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 MXRA7P84157 204 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 RESTQ13127 1097 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 PMS2P11Q13670 270 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 CYP2A13Q16696 494 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 CWC27Q6UX04 472 aaKnown RBP9.19□□□□□ -0.94
MRPS35-204ENST00000542199 ZDHHC24Q6UX98 284 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 Q7L0L9 218 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 CACTINQ8WUQ7 758 aaKnown RBP9.19□□□□□ -0.94
MRPS35-204ENST00000542199 SLC25A43Q8WUT9 341 aaPredicted RBP9.19□□□□□ -0.94
MRPS35-204ENST00000542199 ESR2Q92731 530 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 BADQ92934 168 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 PLEKHG4BQ96PX9 1271 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 STARD7Q9NQZ5 370 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 DIAPH3Q9NSV4 1193 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 GJB4Q9NTQ9 266 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 CCPG1Q9ULG6 757 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 BDP1A6H8Y1 2624 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 ELP1O95163 1332 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 XIRP2A4UGR9 3374 aa9.19□□□□□ -0.94
MRPS35-204ENST00000542199 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.18□□□□□ -0.94
MRPS35-204ENST00000542199 MBD3L4A6NDZ8 208 aaPredicted RBP9.18□□□□□ -0.94
MRPS35-204ENST00000542199 MBD3L3A6NE82 208 aaPredicted RBP9.18□□□□□ -0.94
MRPS35-204ENST00000542199 UNC119BA6NIH7 251 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 ZNF213O14771 459 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 LPXNO60711 386 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 ASGR1P07306 291 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 VIPR2P41587 438 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 CDK7P50613 346 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 ANXA11P50995 505 aaKnown RBP9.18□□□□□ -0.94
MRPS35-204ENST00000542199 LILRA4P59901 499 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 LTBP2Q14767 1821 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 FAM209BQ5JX69 171 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 C9orf50Q5SZB4 431 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 FAM109BQ6ICB4 259 aaPredicted RBP9.18□□□□□ -0.94
MRPS35-204ENST00000542199 TOGARAM2Q6ZUX3 1019 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 UNC13DQ70J99 1090 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 CLNKQ7Z7G1 428 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 KIAA1191Q96A73 305 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 SNX22Q96L94 193 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 GLT1D1Q96MS3 346 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 IL25Q9H293 177 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 MTMR10Q9NXD2 777 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 TBX21Q9UL17 535 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 PNMA2Q9UL42 364 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 DMTF1Q9Y222 760 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 RAD54BQ9Y620 910 aa9.18□□□□□ -0.94
MRPS35-204ENST00000542199 DDX49Q9Y6V7 483 aaKnown RBP9.18□□□□□ -0.94
MRPS35-204ENST00000542199 NCOR1O75376 2440 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 WDR19Q8NEZ3 1342 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 LOC102724159A0A0B4J2E5 919 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 PRAMEF33A0A0G2JMD5 474 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 A0A1W2PS29 197 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 PRAMEF10O60809 474 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 KLRC1P26715 233 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 TNFAIP2Q03169 654 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 BAATQ14032 418 aaPredicted RBP9.17□□□□□ -0.94
MRPS35-204ENST00000542199 IQCB1Q15051 598 aa9.17□□□□□ -0.94
MRPS35-204ENST00000542199 PWP2Q15269 919 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms