RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CASP6P55212 293 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 ARF3P61204 181 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-217ENST00000541578 ARF1P84077 181 aaKnown RBP4.66□□□□□ -1.66
SNHG1-217ENST00000541578 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNHG1-217ENST00000541578 SF3A3Q12874 501 aaKnown RBP eCLIP4.66□□□□□ -1.666e-19■■■□□ 14.9
SNHG1-217ENST00000541578 FOXF2Q12947 444 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 SPATA1Q5VX52 437 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 KIAA1614Q5VZ46 1190 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 HAUS3Q68CZ6 603 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 CEP85Q6P2H3 762 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 FASTKD5Q7L8L6 764 aaKnown RBP4.66□□□□□ -1.66
SNHG1-217ENST00000541578 SLC29A4Q7RTT9 530 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 FSIP1Q8NA03 581 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 OSCP1Q8WVF1 389 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 TBC1D5Q92609 795 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 DPF1Q92782 380 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 STAMQ92783 540 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 GLG1Q92896 1179 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 C7orf26Q96N11 449 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 TWNKQ96RR1 684 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 NUDT22Q9BRQ3 303 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 TRIM5Q9C035 493 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 PAIP1Q9H074 479 aaKnown RBP4.66□□□□□ -1.66
SNHG1-217ENST00000541578 VPS16Q9H269 839 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 CCDC134Q9H6E4 229 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 CXorf36Q9H7Y0 433 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 DLL3Q9NYJ7 618 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 KCND3Q9UK17 655 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 ASAP1Q9ULH1 1129 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 RPS6KL1Q9Y6S9 549 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 C3P01024 1663 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 MED1Q15648 1581 aaPredicted RBP4.65□□□□□ -1.66
SNHG1-217ENST00000541578 PLCH2O75038 1416 aa4.65□□□□□ -1.66
SNHG1-217ENST00000541578 NPATQ14207 1427 aa4.65□□□□□ -1.66
SNHG1-217ENST00000541578 NCOA1Q15788 1441 aa4.65□□□□□ -1.66
SNHG1-217ENST00000541578 ZNF518AQ6AHZ1 1483 aa4.65□□□□□ -1.66
SNHG1-217ENST00000541578 A0A087X0M5 115 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 A0A1B0GX30 115 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 KIF28PB7ZC32 967 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 PSMD9O00233 223 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 JTBO76095 146 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 GFPT2O94808 682 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 FESP07332 822 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ARP10275 920 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 CHMP24386 653 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 LMO1P25800 156 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 NTSR1P30989 418 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ABCG1P45844 678 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ATXN1P54253 815 aaKnown RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 NR1H2P55055 460 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 EEFSECP57772 596 aaKnown RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 GOLGA8FQ08AF8 430 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 PDCLQ13371 301 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 BFSP2Q13515 415 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 CCNG2Q16589 344 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 PTCHD3Q3KNS1 767 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ZIK1Q3SY52 487 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 TBRG1Q3YBR2 411 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 PCID2Q5JVF3 399 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 TTC22Q5TAA0 569 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 DEPDC1Q5TB30 811 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 NAA35Q5VZE5 725 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 DGAT2L7PQ6IED9 249 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ACAD10Q6JQN1 1059 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 PARS2Q7L3T8 475 aaKnown RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ZNF804AQ7Z570 1209 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ARMC8Q8IUR7 673 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 P3H2Q8IVL5 708 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 LRRC71Q8N4P6 559 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 NGDNQ8NEJ9 315 aaKnown RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 SEMA6DQ8NFY4 1073 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 RFFLQ8WZ73 363 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 CENPIQ92674 756 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ERP27Q96DN0 273 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ZDHHC12Q96GR4 267 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 RBM17Q96I25 401 aaKnown RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 REXO5Q96IC2 774 aaKnown RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ZBTB45Q96K62 511 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 CHCHD6Q9BRQ6 235 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ACAD9Q9H845 621 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 G6PC2Q9NQR9 355 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 FBXO28Q9NVF7 368 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 CLIC5Q9NZA1 410 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 SH3BP4Q9P0V3 963 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 CCNL1Q9UK58 526 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 CNTN6Q9UQ52 1028 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 TTLL3Q9Y4R7 772 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 AGLP35573 1532 aa4.65□□□□□ -1.67
SNHG1-217ENST00000541578 ZNF335Q9H4Z2 1342 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-217ENST00000541578 CAMSAP1Q5T5Y3 1602 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 CPS1P31327 1500 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 A0A1W2PPH5 198 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 A6NCN8 305 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 OR2W5A6NFC9 320 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 F5H0A9 414 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-217ENST00000541578 H0YIZ8 118 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 STX16-NPEPL1H3BU86 382 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 STX16O14662 325 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 TSPAN4O14817 238 aa4.64□□□□□ -1.67
SNHG1-217ENST00000541578 GUCY1B2O75343 617 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms