RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 PABPC3Q9H361 631 aaKnown RBP4.43□□□□□ -1.7
KNTC1-211ENST00000541427 HERC5Q9UII4 1024 aaKnown RBP4.43□□□□□ -1.7
KNTC1-211ENST00000541427 TRPC5Q9UL62 973 aaPredicted RBP4.43□□□□□ -1.7
KNTC1-211ENST00000541427 NFU1Q9UMS0 254 aa4.43□□□□□ -1.7
KNTC1-211ENST00000541427 FHOD3Q2V2M9 1422 aa4.43□□□□□ -1.7
KNTC1-211ENST00000541427 SLC22A23A1A5C7 686 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 ADAM10O14672 748 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 TOP3BO95985 862 aaKnown RBP4.42□□□□□ -1.7
KNTC1-211ENST00000541427 HOXD9P28356 352 aaPredicted RBP4.42□□□□□ -1.7
KNTC1-211ENST00000541427 CHKAP35790 457 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 TAS2R50P59544 299 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 FOXO1Q12778 655 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 FAM110CQ1W6H9 321 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 TANGO2Q6ICL3 276 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 JMJD6Q6NYC1 403 aaPredicted RBP4.42□□□□□ -1.7
KNTC1-211ENST00000541427 ERAP2Q6P179 960 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 KLHL17Q6TDP4 642 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 ADGRF3Q8IZF5 1079 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 HMGB4Q8WW32 186 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 PIGKQ92643 395 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 ZBTB9Q96C00 473 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 SORBS1Q9BX66 1292 aaKnown RBP4.42□□□□□ -1.7
KNTC1-211ENST00000541427 NRIP3Q9NQ35 241 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 SHROOM2Q13796 1616 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 HECW1Q76N89 1606 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 SPATA31A5Q5VU36 1347 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 SPATA31A7Q8IWB4 1347 aa4.42□□□□□ -1.7
KNTC1-211ENST00000541427 IPO5O00410 1097 aaKnown RBP4.41□□□□□ -1.7
KNTC1-211ENST00000541427 LARGE1O95461 756 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 ENO1P06733 434 aaKnown RBP4.41□□□□□ -1.7
KNTC1-211ENST00000541427 IGFBP2P18065 325 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 RPS6KB1P23443 525 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 SLC37A1P57057 533 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 AP2B1P63010 937 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 GHRHRQ02643 423 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 TLE3Q04726 772 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 MTA1Q13330 715 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 TTC22Q5TAA0 569 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 ATPAF1Q5TC12 328 aaPredicted RBP4.41□□□□□ -1.7
KNTC1-211ENST00000541427 WDR93Q6P2C0 686 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 NFRKBQ6P4R8 1299 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 ZNF474Q6S9Z5 364 aaPredicted RBP4.41□□□□□ -1.7
KNTC1-211ENST00000541427 SLC39A5Q6ZMH5 540 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 RHPN2Q8IUC4 686 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 MYCT1Q8N699 235 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 EXD3Q8N9H8 876 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 OTUD7AQ8TE49 926 aaPredicted RBP4.41□□□□□ -1.7
KNTC1-211ENST00000541427 CLEC4CQ8WTT0 213 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 SIGLEC11Q96RL6 698 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 SLC12A4Q9UP95 1085 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 CCDC18Q5T9S5 1454 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 EHBP1L1Q8N3D4 1523 aa4.41□□□□□ -1.7
KNTC1-211ENST00000541427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.4□□□□□ -1.7
KNTC1-211ENST00000541427 C2CD4BA6NLJ0 364 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 TCEA3O75764 348 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 CNTN5O94779 1100 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 HEXIM1O94992 359 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 CYP3A4P08684 503 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 CYP21A2P08686 494 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 GRK5P34947 590 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 RBM6P78332 1123 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 SHC2P98077 582 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 HSF1Q00613 529 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 RNASELQ05823 741 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 ETFDHQ16134 617 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 ANXA2RQ3ZCQ2 193 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 GALNTL6Q49A17 601 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 SLC9C1Q4G0N8 1177 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 DHRS13Q6UX07 377 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 RAB11FIP2Q7L804 512 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 COQ8BQ96D53 544 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 DDX23Q9BUQ8 820 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 ELAC1Q9H777 363 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 PRDM16Q9HAZ2 1276 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 SEPSECSQ9HD40 501 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 LIN7CQ9NUP9 197 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 TMEM184CQ9NVA4 438 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 SRP68Q9UHB9 627 aaKnown RBP4.4□□□□□ -1.71
KNTC1-211ENST00000541427 MAGI3Q5TCQ9 1506 aa4.4□□□□□ -1.71
KNTC1-211ENST00000541427 CYP3A7-CYP3A51PA0A087WV96 503 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 AGAP5A6NIR3 686 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 MBD3L5A6NJ08 208 aaPredicted RBP4.39□□□□□ -1.71
KNTC1-211ENST00000541427 NBNO60934 754 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 ALDOAP04075 364 aaKnown RBP4.39□□□□□ -1.71
KNTC1-211ENST00000541427 CTSAP10619 480 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 CYP3A7P24462 503 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 CDK7P50613 346 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 PRKAA2P54646 552 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 POLE2P56282 527 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 ZNF91Q05481 1191 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 TRIP6Q15654 476 aaKnown RBP4.39□□□□□ -1.71
KNTC1-211ENST00000541427 TIGD6Q17RP2 521 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 GRAMD1BQ3KR37 738 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 GLE1Q53GS7 698 aaKnown RBP4.39□□□□□ -1.71
KNTC1-211ENST00000541427 EARS2Q5JPH6 523 aaKnown RBP4.39□□□□□ -1.71
KNTC1-211ENST00000541427 ZNF569Q5MCW4 686 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 ANO7Q6IWH7 933 aa4.39□□□□□ -1.71
KNTC1-211ENST00000541427 CRELD2Q6UXH1 353 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms