RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FIS1Q9Y3D6 152 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 PHIPQ8WWQ0 1821 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 BCLAF3A2AJT9 711 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 TMEM233B4DJY2 109 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 TK2O00142 265 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ACKR2O00590 384 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 TRDMT1O14717 391 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 HNRNPRO43390 633 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 CREB3O43889 395 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 COX4I1P13073 169 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 DPP6P42658 865 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 DEUP1Q05D60 604 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZNF460Q14592 562 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 NCBP2-AS2Q69YL0 99 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 RBM44Q6ZP01 1051 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 CATSPERGQ6ZRH7 1159 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 TSHZ1Q6ZSZ6 1077 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM43BQ6ZT52 329 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ILDR2Q71H61 639 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ARHGAP22Q7Z5H3 698 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 MAP7D3Q8IWC1 876 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 DCLK2Q8N568 766 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 OR52K1Q8NGK4 314 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 GRIN3AQ8TCU5 1115 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 SEPT1Q8WYJ6 367 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 RPS6KL1Q9Y6S9 549 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 RNF103O00237 685 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 CCNT2O60583 730 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 SERPINE1P05121 402 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 GMPSP49915 693 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 AP3M2P53677 418 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ABCE1P61221 599 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 MS4A2Q01362 244 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 SURF1Q15526 300 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 OLFML2BQ68BL8 750 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 PGM2L1Q6PCE3 622 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 UGT2A3Q6UWM9 527 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 RPS27LQ71UM5 84 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 LILRA2Q8N149 483 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 PPP4R1Q8TF05 950 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 C18orf25Q96B23 403 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 DCUN1D1Q96GG9 259 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 CENPKQ9BS16 269 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 NUF2Q9BZD4 464 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 LIN28AQ9H9Z2 209 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 GPAMQ9HCL2 828 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 SNX15Q9NRS6 342 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 SLC4A7Q9Y6M7 1214 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ATP9BO43861 1147 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 FKBP6O75344 327 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 HSPA4LO95757 839 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ENO3P13929 434 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 PCSK6P29122 969 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ALDH1A3P47895 512 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 CDKL1Q00532 357 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 NIPAL4Q0D2K0 466 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 KLF10Q13118 480 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 ACAP1Q15027 740 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 IER5Q5VY09 327 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 NME8Q8N427 588 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 AGBL3Q8NEM8 1001 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 RTP4Q96DX8 246 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 MFSD3Q96ES6 412 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 CATSPER2Q96P56 530 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 CDRT15Q96T59 188 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 TBCBQ99426 244 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 SEMA6AQ9H2E6 1030 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 PREBQ9HCU5 417 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 DMAP1Q9NPF5 467 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 GJD2Q9UKL4 321 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 SSX2IPQ9Y2D8 614 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 DTNAQ9Y4J8 743 aa10.63□□□□□ -0.71
CDC42SE1-207ENST00000540998 LAMA2P24043 3122 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 PHGDHO43175 533 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 VDRP11473 427 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 CPA3P15088 417 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 HDCP19113 662 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 SCNN1BP51168 640 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 SLC5A9Q2M3M2 681 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 HSP90AA5PQ58FG0 334 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 NXNQ6DKJ4 435 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 FBXW8Q8N3Y1 598 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 ACTRT2Q8TDY3 377 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 HTR3CQ8WXA8 447 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 ATP2A3Q93084 1043 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZNF669Q96BR6 464 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 RCN3Q96D15 328 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 GPR20Q99678 358 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM192AQ9GZU8 254 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 SUDS3Q9H7L9 328 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 GMPR2Q9P2T1 348 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 BIRC5O15392 142 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 CSPG5O95196 566 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 ARF4P18085 180 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 TGM2P21980 687 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 IGFBP6P24592 240 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 BAG6P46379 1132 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 USP46P62068 366 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 EN1Q05925 392 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 NRF1Q16656 503 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms