RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 NOA1Q8NC60 698 aaKnown RBP8.71□□□□□ -1.02
CHD4-208ENST00000540960 ZSCAN18Q8TBC5 510 aaPredicted RBP8.71□□□□□ -1.02
CHD4-208ENST00000540960 RLN3Q8WXF3 142 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 CD101Q93033 1021 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 LRRC45Q96CN5 670 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 HSFY1Q96LI6 401 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 TMEM209Q96SK2 561 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 C11orf70Q9BRQ4 267 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 MED4Q9NPJ6 270 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 ASNSD1Q9NWL6 643 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 KIAA1522Q9P206 1035 aaPredicted RBP8.71□□□□□ -1.02
CHD4-208ENST00000540960 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHD4-208ENST00000540960 SNX9Q9Y5X1 595 aa8.71□□□□□ -1.02
CHD4-208ENST00000540960 SETD2Q9BYW2 2564 aaPredicted RBP8.71□□□□□ -1.02
CHD4-208ENST00000540960 TMEM110-MUSTN1A8MSY1 372 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 A8MXQ7 604 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 O00370 1275 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 PDE2AO00408 941 aaPredicted RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 PLK4O00444 970 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 ATG13O75143 517 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 GJB3O75712 270 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 APBB3O95704 486 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 ATXN1LP0C7T5 689 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 WARSP23381 471 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 ITPKAP23677 461 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 BRD2P25440 801 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 OR1D2P34982 312 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 PTPN7P35236 360 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 PEX5P50542 639 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 DNA2P51530 1060 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 NDST1P52848 882 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 BCAT1P54687 386 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 PSMC1P62191 440 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 SEMG2Q02383 582 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 CAV1Q03135 178 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 C2orf54Q08AI8 447 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 PSMD5Q16401 504 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 USP39Q53GS9 565 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 SPDYCQ5MJ68 293 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 UBXN11Q5T124 520 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 CFAP58Q5T655 872 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 NAIF1Q69YI7 327 aaPredicted RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 SCARA5Q6ZMJ2 495 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 VSIG1Q86XK7 387 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 CEP57Q86XR8 500 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 NAXDQ8IW45 347 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 MAP7D3Q8IWC1 876 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 PDCD7Q8N8D1 485 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 OR6B3Q8NGW1 331 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 CXorf38Q8TB03 319 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 HASPINQ8TF76 798 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 C18orf25Q96B23 403 aaPredicted RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 GAD1Q99259 594 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 PSMB7Q99436 277 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 KRT12Q99456 494 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 PAAF1Q9BRP4 392 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 COLEC11Q9BWP8 271 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 EIF2AQ9BY44 585 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 NXF3Q9H4D5 531 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 DNAAF2Q9NVR5 837 aaKnown RBP8.7□□□□□ -1.02
CHD4-208ENST00000540960 PILRBQ9UKJ0 227 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 ADAM28Q9UKQ2 775 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 FBN3Q75N90 2809 aa8.7□□□□□ -1.02
CHD4-208ENST00000540960 ANTXRLA6NF34 631 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 ARL5CA6NH57 179 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 GOLGA8CPA6NN73 597 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 A6NNZ2 444 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 M0QYV0 167 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 TERTO14746 1132 aaKnown RBP8.69□□□□□ -1.02
CHD4-208ENST00000540960 TNFRSF10BO14763 440 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 TRAPPC3O43617 180 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 OPA1O60313 960 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 PHF2O75151 1096 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 MICAL2O94851 1124 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 DKK1O94907 266 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 GLI1P08151 1106 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 CR2P20023 1033 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 PCK1P35558 622 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 SSR1P43307 286 aaKnown RBP8.69□□□□□ -1.02
CHD4-208ENST00000540960 SCNN1GP51170 649 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 DR1Q01658 176 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 CREMQ03060 361 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 TLE3Q04726 772 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 FCHO2Q0JRZ9 810 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 BST2Q10589 180 aaKnown RBP8.69□□□□□ -1.02
CHD4-208ENST00000540960 GRIK3Q13003 919 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 PDCLQ13371 301 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 RAB33AQ14088 237 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
CHD4-208ENST00000540960 DMC1Q14565 340 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 CYP1B1Q16678 543 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 TUBB8Q3ZCM7 444 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 ZNF394Q53GI3 561 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 BOLA3Q53S33 107 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 TMEM196Q5HYL7 178 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 BEND6Q5SZJ8 279 aaPredicted RBP8.69□□□□□ -1.02
CHD4-208ENST00000540960 ZFYVE27Q5T4F4 411 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 LIMS2Q7Z4I7 341 aa8.69□□□□□ -1.02
CHD4-208ENST00000540960 SLC13A5Q86YT5 568 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms