RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 TCP11X1B4DZS4 312 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 TMEM189-UBE2V1I3L0A0 370 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 EEF2KO00418 725 aaKnown RBP10.45□□□□□ -0.74
LMO3-224ENST00000540848 CLDN5O00501 218 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 TYROBPO43914 113 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 KRT37O76014 449 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 OAS1P00973 400 aaKnown RBP10.45□□□□□ -0.74
LMO3-224ENST00000540848 APRTP07741 180 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 COL6A1P12109 1028 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 GOT1P17174 413 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 MX2P20592 715 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 PRKCHP24723 683 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 CNTFP26441 200 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 SSTR1P30872 391 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 SERPINB6P35237 376 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 ADRA1BP35368 520 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 YWHAGP61981 247 aaKnown RBP eCLIP10.45□□□□□ -0.74
LMO3-224ENST00000540848 TSPY1Q01534 308 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 SP3Q02447 781 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 GBE1Q04446 702 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 ZNF33AQ06730 810 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 NAB1Q13506 487 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 ITGA7Q13683 1181 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 DPYSQ14117 519 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 TRIM71Q2Q1W2 868 aaKnown RBP10.45□□□□□ -0.74
LMO3-224ENST00000540848 TIGD5Q53EQ6 642 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 RNF187Q5TA31 235 aaPredicted RBP10.45□□□□□ -0.74
LMO3-224ENST00000540848 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 OTUD1Q5VV17 481 aaPredicted RBP10.45□□□□□ -0.74
LMO3-224ENST00000540848 KIAA0319Q5VV43 1072 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 C4orf50Q6ZRC1 276 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 RFX8Q6ZV50 586 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 SLC26A11Q86WA9 606 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 MTBPQ96DY7 904 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 WDR83Q9BRX9 315 aaKnown RBP10.45□□□□□ -0.74
LMO3-224ENST00000540848 MIOSQ9NXC5 875 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 KANSL3Q9P2N6 904 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 ZC3H7BQ9UGR2 993 aaKnown RBP10.45□□□□□ -0.74
LMO3-224ENST00000540848 FBXW11Q9UKB1 542 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 CHMP2BQ9UQN3 213 aa10.45□□□□□ -0.74
LMO3-224ENST00000540848 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
LMO3-224ENST00000540848 MYBPHLA2RUH7 354 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 CASTOR2A6NHX0 329 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 CCT8L1PA6NM43 557 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 MEIS3P2A8K0S8 358 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 ERI2A8K979 691 aaKnown RBP10.44□□□□□ -0.74
LMO3-224ENST00000540848 HHLA1C9JL84 531 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 KBTBD13C9JR72 458 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 AP3B1O00203 1094 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 BEST1O76090 585 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 B3GAT3O94766 335 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 CA4P22748 312 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 AMPD1P23109 780 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 SERPINB9P50453 376 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 SRSF11Q05519 484 aaKnown RBP10.44□□□□□ -0.74
LMO3-224ENST00000540848 SLC10A2Q12908 348 aaPredicted RBP10.44□□□□□ -0.74
LMO3-224ENST00000540848 SEMA3BQ13214 749 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 MPP2Q14168 576 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 MTFR1Q15390 333 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 SEPT7Q16181 437 aaKnown RBP10.44□□□□□ -0.74
LMO3-224ENST00000540848 PKN2Q16513 984 aaKnown RBP10.44□□□□□ -0.74
LMO3-224ENST00000540848 PDK4Q16654 411 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 PARP6Q2NL67 630 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 TTC39BQ5VTQ0 682 aaPredicted RBP10.44□□□□□ -0.74
LMO3-224ENST00000540848 HHATQ5VTY9 493 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 NUGGCQ68CJ6 796 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 GLB1LQ6UWU2 654 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 CAND1Q86VP6 1230 aaKnown RBP10.44□□□□□ -0.74
LMO3-224ENST00000540848 LRRC6Q86X45 466 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 ECHDC2Q86YB7 292 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 C3orf58Q8NDZ4 430 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 GSDMBQ8TAX9 411 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 SLC7A14Q8TBB6 771 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 CCDC110Q8TBZ0 833 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 MGARPQ8TDB4 240 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 DCAKDQ8WVC6 231 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 RSPH1Q8WYR4 309 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 LPPQ93052 612 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 MYLPFQ96A32 169 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 VAT1Q99536 393 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 ADAM2Q99965 735 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 FTHL17Q9BXU8 183 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 ARHGAP39Q9C0H5 1083 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 RGS18Q9NS28 235 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 IGSF9Q9P2J2 1179 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 ARL2BPQ9Y2Y0 163 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 STARD13Q9Y3M8 1113 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 THSD7BQ9C0I4 1608 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 PATJQ8NI35 1801 aa10.44□□□□□ -0.74
LMO3-224ENST00000540848 DCLK1O15075 740 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 KRT38O76015 456 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 APOEP02649 317 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 MT-ND3P03897 115 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 THBS1P07996 1170 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 NCAM1P13591 858 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 ALADP13716 330 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 CREB1P16220 341 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 CCND3P30281 292 aaPredicted RBP10.43□□□□□ -0.74
LMO3-224ENST00000540848 CXCR3P49682 368 aa10.43□□□□□ -0.74
LMO3-224ENST00000540848 ATXN1P54253 815 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms