RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 MSI1O43347 362 aaKnown RBP15.27■□□□□ 0.03
TSFM-207ENST00000540550 MT-ND3P03897 115 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 KRT4P19013 534 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 FGFR3P22607 806 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 GARSP41250 739 aaKnown RBP15.27■□□□□ 0.03
TSFM-207ENST00000540550 GPR15P49685 360 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 SPARCL1Q14515 664 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 PPP2R5DQ14738 602 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 SEPT7Q16181 437 aaKnown RBP15.27■□□□□ 0.03
TSFM-207ENST00000540550 ITPRIPL1Q6GPH6 555 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 CASC4Q6P4E1 433 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 LRRC8BQ6P9F7 803 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 UNC5AQ6ZN44 842 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 SLC26A11Q86WA9 606 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 PPM1NQ8N819 430 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 ANKS4BQ8N8V4 417 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 CCDC197Q8NCU1 140 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 TGS1Q96RS0 853 aaKnown RBP15.27■□□□□ 0.03
TSFM-207ENST00000540550 TMEM175Q9BSA9 504 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 GPR62Q9BZJ7 368 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 CATSPERBQ9H7T0 1116 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 NMUR1Q9HB89 426 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 PAK6Q9NQU5 681 aaPredicted RBP15.27■□□□□ 0.03
TSFM-207ENST00000540550 PCDHA11Q9Y5I1 949 aa15.27■□□□□ 0.03
TSFM-207ENST00000540550 NUP205Q92621 2012 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 GOLGA6L7A0A1B0GV03 622 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 SDR42E2A6NKP2 422 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 TBKBP1A7MCY6 615 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 H7C4K7 107 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 FGF10O15520 208 aaPredicted RBP15.26■□□□□ 0.03
TSFM-207ENST00000540550 PAGE1O75459 146 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 PRKCHP24723 683 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 GRIA1P42261 906 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 EIF4EBP2Q13542 120 aaPredicted RBP15.26■□□□□ 0.03
TSFM-207ENST00000540550 MRPL58Q14197 206 aaKnown RBP15.26■□□□□ 0.03
TSFM-207ENST00000540550 HHATQ5VTY9 493 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 FUT10Q6P4F1 479 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 PRPF39Q86UA1 669 aaKnown RBP15.26■□□□□ 0.03
TSFM-207ENST00000540550 LRRC6Q86X45 466 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 MPP5Q8N3R9 675 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 STKLD1Q8NE28 680 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 TET1Q8NFU7 2136 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 ALKBH8Q96BT7 664 aaKnown RBP15.26■□□□□ 0.03
TSFM-207ENST00000540550 TBC1D31Q96DN5 1066 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 B3GALT6Q96L58 329 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 MARCH5Q9NX47 278 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 TRHDEQ9UKU6 1024 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 BRCA2P51587 3418 aa15.26■□□□□ 0.03
TSFM-207ENST00000540550 ZWINTO95229 277 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 RPA3P35244 121 aaPredicted RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 PGFP49763 221 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 IFT88Q13099 833 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 LGSNQ5TDP6 509 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 TTC39BQ5VTQ0 682 aaPredicted RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 NUGGCQ68CJ6 796 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 MZB1Q8WU39 189 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 DEPDC1BQ8WUY9 529 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 SCLYQ96I15 445 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 VAT1Q99536 393 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 ELAC2Q9BQ52 826 aaKnown RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 HIPK3Q9H422 1215 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 NUDT5Q9UKK9 219 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 WDR27A2RRH5 827 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 TYROBPO43914 113 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 KRT37O76014 449 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 RTN3O95197 1032 aaPredicted RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 MOCS2O96007 188 aaPredicted RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 SLC2A3P11169 496 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 WDR4P57081 412 aaKnown RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 SESN2P58004 480 aaPredicted RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 FAAP100Q0VG06 881 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 TCTN1Q2MV58 587 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 RNF187Q5TA31 235 aaPredicted RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 MSANTD2Q6P1R3 559 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 CCNJLQ8IV13 435 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 LRRC43Q8N309 656 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 OTUD6BQ8N6M0 293 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 ATAD1Q8NBU5 361 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 DENND1AQ8TEH3 1009 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 CELF6Q96J87 481 aaKnown RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 FCRL2Q96LA5 508 aaPredicted RBP15.25■□□□□ 0.03
TSFM-207ENST00000540550 RNF208Q9H0X6 261 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 FGFR1OP2Q9NVK5 253 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 GMIPQ9P107 970 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 ZNF180Q9UJW8 692 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 OGDHLQ9ULD0 1010 aa15.25■□□□□ 0.03
TSFM-207ENST00000540550 MICAL3Q7RTP6 2002 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 DFFAO00273 331 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 PARNO95453 639 aaKnown RBP15.24■□□□□ 0.03
TSFM-207ENST00000540550 ASMTLO95671 621 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 CCL5P13501 91 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 PGAM1P18669 254 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 MGAT1P26572 445 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 YWHAQP27348 245 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 ATN1P54259 1190 aaPredicted RBP15.24■□□□□ 0.03
TSFM-207ENST00000540550 CCL23P55773 120 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 SMARCB1Q12824 385 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 MTFR1Q15390 333 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 PIGWQ7Z7B1 504 aa15.24■□□□□ 0.03
TSFM-207ENST00000540550 ATPAF2Q8N5M1 289 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms