RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 LIN28AQ9H9Z2 209 aaKnown RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 CYLDQ9NQC7 956 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 COL20A1Q9P218 1284 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 PIN4Q9Y237 131 aaKnown RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 MYRFQ9Y2G1 1151 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 CUL9Q8IWT3 2517 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 CYP3A7-CYP3A51PA0A087WV96 503 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 CHRNB2P17787 502 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 CYP3A7P24462 503 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 SLC5A3P53794 718 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 MRPS6P82932 125 aaKnown RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 RELAQ04206 551 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 PPP3CAQ08209 521 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 ITGADQ13349 1161 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 UBAP2LQ14157 1087 aaKnown RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 C1orf186Q6ZWK4 172 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 NOP9Q86U38 636 aaKnown RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 CPNE8Q86YQ8 564 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 PQLC1Q8N2U9 271 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 CCDC33Q8N5R6 958 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 C12orf50Q8NA57 414 aaPredicted RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 PLEKHO2Q8TD55 490 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 EPB41L1Q9H4G0 881 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 NRDE2Q9H7Z3 1164 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 COPS7BQ9H9Q2 264 aaPredicted RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 ARAP2Q8WZ64 1704 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 TRIM49D1C9J1S8 452 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 EDIL3O43854 480 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 ZNF12P17014 697 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 DMP1Q13316 513 aaPredicted RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 BMT2Q1RMZ1 405 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 TIGD5Q53EQ6 642 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 PLEKHG4Q58EX7 1191 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 C1orf53Q5VUE5 145 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 TDRPQ86YL5 185 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 FBXL13Q8NEE6 735 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 HERVK_113Q902F9 699 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 PRR11Q96HE9 360 aaPredicted RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 APOPT1Q96IL0 206 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 PI4K2AQ9BTU6 479 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 C6orf203Q9P0P8 240 aaPredicted RBP8.91□□□□□ -0.98
DDB1-217ENST00000540166 DAPK2Q9UIK4 370 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 PCDHB4Q9Y5E5 795 aa8.91□□□□□ -0.98
DDB1-217ENST00000540166 C1orf232A0A0U1RR37 186 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 ZBTB11O95625 1053 aaPredicted RBP8.9□□□□□ -0.98
DDB1-217ENST00000540166 PDGFRBP09619 1106 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 TFPTP0C1Z6 253 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 CYP11B1P15538 503 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 CD52P31358 61 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 MRPS22P82650 360 aaKnown RBP8.9□□□□□ -0.98
DDB1-217ENST00000540166 EGFLAMQ63HQ2 1017 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 CES5AQ6NT32 575 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 POTEHQ6S545 545 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 DENND5BQ6ZUT9 1274 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 FBXO36Q8NEA4 188 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 DENND1AQ8TEH3 1009 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 DHX38Q92620 1227 aaKnown RBP8.9□□□□□ -0.98
DDB1-217ENST00000540166 HLA-CQ95604 372 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 NRBF2Q96F24 287 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 SAMD11Q96NU1 681 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 TSPAN18Q96SJ8 248 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 ADAM2Q99965 735 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 TMEM79Q9BSE2 394 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 PBX4Q9BYU1 374 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 KMT5AQ9NQR1 393 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 SEPT3Q9UH03 358 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 CROTQ9UKG9 612 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 CFAP99D6REC4 459 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 KPNA4O00629 521 aaPredicted RBP8.9□□□□□ -0.98
DDB1-217ENST00000540166 WEE2P0C1S8 567 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 ZSCAN5DPP0CG00 497 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 GSTT2P0CG29 244 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 GSTT2BP0CG30 244 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 TPD52P55327 224 aaPredicted RBP8.9□□□□□ -0.98
DDB1-217ENST00000540166 TSPY1Q01534 308 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 BST1Q10588 318 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 XKR3Q5GH77 459 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 LMBRD2Q68DH5 695 aaPredicted RBP8.9□□□□□ -0.98
DDB1-217ENST00000540166 DUS1LQ6P1R4 473 aaKnown RBP8.9□□□□□ -0.98
DDB1-217ENST00000540166 ZNF786Q8N393 782 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 LRRC71Q8N4P6 559 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 EPS8L1Q8TE68 723 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 SKA1Q96BD8 255 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 OSMRQ99650 979 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 RAB26Q9ULW5 256 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 POLIQ9UNA4 740 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 NCOR1O75376 2440 aa8.9□□□□□ -0.98
DDB1-217ENST00000540166 E9PBE3 544 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 CALCAP01258 141 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 ARP10275 920 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 PHKA2P46019 1235 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 ALCAMQ13740 583 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 SPIDRQ14159 915 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 GRIN2CQ14957 1233 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 NR1D2Q14995 579 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 FASTKD3Q14CZ7 662 aaKnown RBP8.9□□□□□ -0.99
DDB1-217ENST00000540166 SNRNP35Q16560 246 aaKnown RBP8.9□□□□□ -0.99
DDB1-217ENST00000540166 C6orf52Q5T4I8 152 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 ACAD10Q6JQN1 1059 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms