RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 TIMM44O43615 452 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 HUS1O60921 280 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 MTRF1O75570 445 aaKnown RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 AKAP3O75969 853 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 DDHD2O94830 711 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 ZWINTO95229 277 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 AFPP02771 609 aaKnown RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 SOD2P04179 222 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 URODP06132 367 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 KRT19P08727 400 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 CCDC159P0C7I6 412 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 MSL3P1P0C860 447 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 HOXB4P17483 251 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 POU3F3P20264 500 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 CDC25CP30307 473 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 SLC11A1P49279 550 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 GATMP50440 423 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 SPEM2Q0P670 501 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 CCDC6Q16204 474 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 SEZ6Q53EL9 994 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TIGD5Q53EQ6 642 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 GLRA4Q5JXX5 417 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 C10orf76Q5T2E6 689 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TCERG1LQ5VWI1 586 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 KRT39Q6A163 491 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 DSTYKQ6XUX3 929 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 Q6ZNX1 250 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 LRRC74BQ6ZQY2 392 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 RGS9BPQ6ZS82 235 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 LRRC55Q6ZSA7 311 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 ANKS3Q6ZW76 656 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TMC7Q7Z402 723 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TMCO2Q7Z6W1 182 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 PATL1Q86TB9 770 aaKnown RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 ZNF280BQ86YH2 543 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 THEM5Q8N1Q8 247 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TMEM86AQ8N2M4 240 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 BBS5Q8N3I7 341 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 CCDC42Q96M95 316 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 RUNDC3BQ96NL0 473 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 CDCA3Q99618 268 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 ELAC2Q9BQ52 826 aaKnown RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 EMILIN2Q9BXX0 1053 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 LACRTQ9GZZ8 138 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TMEM8AQ9HCN3 771 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 PALMDQ9NP74 551 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 NLRC4Q9NPP4 1024 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TLR9Q9NR96 1032 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 MRPL17Q9NRX2 175 aaKnown RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 RHBDL2Q9NX52 303 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 MIOSQ9NXC5 875 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 HSFX1Q9UBD0 423 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TRIM10Q9UDY6 481 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 MKL2Q9ULH7 1088 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 ACTL7BQ9Y614 415 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 USH1CQ9Y6N9 552 aa7.77□□□□□ -1.17
NECAP1-204ENST00000540083 TDRD15B5MCY1 1934 aaKnown RBP7.77□□□□□ -1.17
NECAP1-204ENST00000540083 A0A088AWK7 358 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 SH3PXD2BA1X283 911 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 LCHNA4D1U4 455 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 CASTOR2A6NHX0 329 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 TGFBR3LH3BV60 316 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 PIRO00625 290 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 SIN3BO75182 1162 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 NFICP08651 508 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 CTSAP10619 480 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 ODC1P11926 461 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 MYOGP15173 224 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 TYMPP19971 482 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 PTPN4P29074 926 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 SERPINB3P29508 390 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 HALP42357 657 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 MTIF2P46199 727 aaKnown RBP7.76□□□□□ -1.17
NECAP1-204ENST00000540083 CLCNKBP51801 687 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 GUCY2FP51841 1108 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 STX17P56962 302 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 YWHAEP62258 255 aaKnown RBP7.76□□□□□ -1.17
NECAP1-204ENST00000540083 SLC7A5Q01650 507 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 UBXN1Q04323 297 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 SMARCB1Q12824 385 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 HLTFQ14527 1009 aaKnown RBP eCLIP7.76□□□□□ -1.17
NECAP1-204ENST00000540083 NAB2Q15742 525 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 DCAF17Q5H9S7 520 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-204ENST00000540083 DEPDC1Q5TB30 811 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 SNX30Q5VWJ9 437 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 C9orf57Q5W0N0 161 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 RWDD4Q6NW29 188 aaKnown RBP7.76□□□□□ -1.17
NECAP1-204ENST00000540083 FUT10Q6P4F1 479 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 LINC00114Q6XXX2 140 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 RTL10Q7L3V2 364 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 NANOGNBQ7Z5D8 188 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 ZC3H18Q86VM9 953 aaKnown RBP7.76□□□□□ -1.17
NECAP1-204ENST00000540083 SCUBE1Q8IWY4 988 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 VPS52Q8N1B4 723 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 DEFB123Q8N688 67 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 POF1BQ8WVV4 589 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 UTP4Q969X6 686 aaKnown RBP7.76□□□□□ -1.17
NECAP1-204ENST00000540083 NACC2Q96BF6 587 aa7.76□□□□□ -1.17
NECAP1-204ENST00000540083 MRPL38Q96DV4 380 aaKnown RBP7.76□□□□□ -1.17
NECAP1-204ENST00000540083 BIRC8Q96P09 236 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms