RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 IGLV3-10A0A075B6K4 115 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 LRRD1A4D1F6 860 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 DRGXA6NNA5 263 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 FAM72CH0Y354 149 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 EEF2KO00418 725 aaKnown RBP15.9■□□□□ 0.14
DDB1-216ENST00000539739 GFRA2O00451 464 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 TBL1XO60907 577 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 CYP17A1P05093 508 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 ADH5P11766 374 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 KDELR1P24390 212 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 EPHB2P29323 1055 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 CETN2P41208 172 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 TNK2Q07912 1038 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 SEMA3BQ13214 749 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 ITPRIPL2Q3MIP1 535 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 C5orf22Q49AR2 442 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 FAM72AQ5TYM5 149 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 MANEALQ5VSG8 457 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 FAM72DQ6L9T8 149 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 FAM72BQ86X60 149 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 ZNF683Q8IZ20 524 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 RCOR2Q8IZ40 523 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 DNASE1L2Q92874 299 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 BHMTQ93088 406 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 RBM41Q96IZ5 413 aaKnown RBP15.9■□□□□ 0.14
DDB1-216ENST00000539739 CALN1Q9BXU9 219 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 ZYG11BQ9C0D3 744 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 RETREG1Q9H6L5 497 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 CATSPERBQ9H7T0 1116 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 DONSONQ9NYP3 566 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 GTSE1Q9NYZ3 720 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 MARK1Q9P0L2 795 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 RCOR3Q9P2K3 495 aaPredicted RBP15.9■□□□□ 0.14
DDB1-216ENST00000539739 SORCS3Q9UPU3 1222 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 NEDD8-MDP1E9PL57 170 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 CTIFO43310 598 aaKnown RBP15.9■□□□□ 0.14
DDB1-216ENST00000539739 SRFP11831 508 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 HCAR3P49019 387 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 RPS24P62847 133 aaKnown RBP15.9■□□□□ 0.14
DDB1-216ENST00000539739 AMPD2Q01433 879 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 TERF2Q15554 542 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 VSIG1Q86XK7 387 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 GJD3Q8N144 294 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 CFAP52Q8N1V2 620 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 ZNF557Q8N988 423 aaPredicted RBP15.9■□□□□ 0.14
DDB1-216ENST00000539739 EXD1Q8NHP7 514 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 FAM71BQ8TC56 605 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 RAPGEF5Q92565 580 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 IGSF8Q969P0 613 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 PRICKLE1Q96MT3 831 aaPredicted RBP15.9■□□□□ 0.14
DDB1-216ENST00000539739 XPO6Q96QU8 1125 aaKnown RBP15.9■□□□□ 0.14
DDB1-216ENST00000539739 ZNF670Q9BS34 389 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 PLK2Q9NYY3 685 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 MYO10Q9HD67 2058 aa15.9■□□□□ 0.14
DDB1-216ENST00000539739 A0A1B0GVM2 712 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 TCAF2A6NFQ2 919 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 PI4K2BG5E9Z4 385 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 ARNTLO00327 626 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 FGF10O15520 208 aaPredicted RBP15.89■□□□□ 0.13
DDB1-216ENST00000539739 HOXC11O43248 304 aaPredicted RBP15.89■□□□□ 0.13
DDB1-216ENST00000539739 CLDN11O75508 207 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 PENKP01210 267 aaPredicted RBP15.89■□□□□ 0.13
DDB1-216ENST00000539739 TYRP14679 529 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 GOT1P17174 413 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 MARCKSL1P49006 195 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 PEX5P50542 639 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 DNA2P51530 1060 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 ARSEP51690 589 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 CDH4P55283 916 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 DPYSL3Q14195 570 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 FYB2Q5VWT5 728 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 RFX8Q6ZV50 586 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 CHST9Q7L1S5 443 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 RNF135Q8IUD6 432 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 CCDC50Q8IVM0 306 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 RNF25Q96BH1 459 aaPredicted RBP15.89■□□□□ 0.13
DDB1-216ENST00000539739 MYEOVQ96EZ4 313 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 MAK16Q9BXY0 300 aaKnown RBP15.89■□□□□ 0.13
DDB1-216ENST00000539739 SLC2A4RGQ9NR83 387 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 MPP6Q9NZW5 540 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 CWC15Q9P013 229 aaKnown RBP15.89■□□□□ 0.13
DDB1-216ENST00000539739 DUSP12Q9UNI6 340 aa15.89■□□□□ 0.13
DDB1-216ENST00000539739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.88■□□□□ 0.13
DDB1-216ENST00000539739 ZNF487B1APH4 448 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 DDX3YO15523 660 aaKnown RBP15.88■□□□□ 0.13
DDB1-216ENST00000539739 NARSO43776 548 aaKnown RBP15.88■□□□□ 0.13
DDB1-216ENST00000539739 RHOQP17081 205 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 HOXC13P31276 330 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 SGSHP51688 502 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 COPS2P61201 443 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 ZNF177Q13360 481 aaPredicted RBP15.88■□□□□ 0.13
DDB1-216ENST00000539739 CARNMT1Q8N4J0 409 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 TTC8Q8TAM2 541 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 CSPG4P5Q96PW8 444 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 TCF20Q9UGU0 1960 aaKnown RBP15.88■□□□□ 0.13
DDB1-216ENST00000539739 UNC80Q8N2C7 3258 aa15.88■□□□□ 0.13
DDB1-216ENST00000539739 OTOL1A6NHN0 477 aaPredicted RBP15.87■□□□□ 0.13
DDB1-216ENST00000539739 H0Y626 953 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 KIF1CO43896 1103 aaKnown RBP15.87■□□□□ 0.13
DDB1-216ENST00000539739 CNTN5O94779 1100 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms