RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 FAM72DQ6L9T8 149 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 LRRC31Q6UY01 552 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 CYP4V2Q6ZWL3 525 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 FAM72BQ86X60 149 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 MFN1Q8IWA4 741 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 LRRC8AQ8IWT6 810 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 RHOT2Q8IXI1 618 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 PYROXD2Q8N2H3 581 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 TERB1Q8NA31 727 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 RFFLQ8WZ73 363 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 CLDN23Q96B33 292 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 DESI2Q9BSY9 194 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 SNRNP25Q9BV90 132 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 SLC2A11Q9BYW1 496 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 OSBPL2Q9H1P3 480 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 SLC27A6Q9Y2P4 619 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 BDP1A6H8Y1 2624 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 NCOR1O75376 2440 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 IGLV3-10A0A075B6K4 115 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 A0A0A0MRY4 1105 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 TBC1D3BA6NDS4 549 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 PRRT4C9JH25 899 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 H0Y626 953 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 PRPSAP2O60256 369 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 RNF40O75150 1001 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 MTA2O94776 668 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 PROSCO94903 275 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 IL1R2P27930 398 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 HLA-FP30511 346 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 CD70P32970 193 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 PCK1P35558 622 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 TNFRSF4P43489 277 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 AIF1P55008 147 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 NRG1Q02297 640 aaPredicted RBP13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 LMAN2Q12907 356 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 GAS6Q14393 721 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 TCEAL1Q15170 157 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 CA9Q16790 459 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 ALFQ53S48 1182 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 FSCBQ5H9T9 825 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 ERMARDQ5T6L9 678 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 ACBD5Q5T8D3 534 aaPredicted RBP13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 EMC10Q5UCC4 262 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 MANEALQ5VSG8 457 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 TTC39BQ5VTQ0 682 aaPredicted RBP13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 Q6ZS52 159 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 FIBINQ8TAL6 211 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 ANP32BQ92688 251 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 ABCB8Q9NUT2 735 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 MPP6Q9NZW5 540 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 OR12D3Q9UGF7 316 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 AP4E1Q9UPM8 1137 aa13.11□□□□□ -0.31
TSPAN9-207ENST00000539631 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 TCAF2A6NFQ2 919 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 LRIG2O94898 1065 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 PABPC1P11940 636 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 NOP2P46087 812 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 RPS9P46781 194 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 VAV2P52735 878 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 CDH4P55283 916 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 KRT83P78385 493 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 CCZ1BP86790 482 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 CCZ1P86791 482 aaPredicted RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 CDH18Q13634 790 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 FBXO43Q4G163 708 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 KCNT1Q5JUK3 1230 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 CHST9Q7L1S5 443 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 ANKS1BQ7Z6G8 1248 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 KIAA0907Q7Z7F0 614 aaPredicted RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 CCDC117Q8IWD4 279 aaPredicted RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 SYNPOQ8N3V7 929 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 CCDC112Q8NEF3 446 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 LMLNQ96KR4 655 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 ZYG11BQ9C0D3 744 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 LACRTQ9GZZ8 138 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 CHRDQ9H2X0 955 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 DHX35Q9H5Z1 703 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 ZDHHC4Q9NPG8 344 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 PPARGC1AQ9UBK2 798 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 SALL4Q9UJQ4 1053 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 HCN2Q9UL51 889 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 NEU3Q9UQ49 428 aa13.1□□□□□ -0.31
TSPAN9-207ENST00000539631 A0A0A6YYK5 440 aaPredicted RBP13.09□□□□□ -0.31
TSPAN9-207ENST00000539631 A0A0U1RQJ8 604 aa13.09□□□□□ -0.31
TSPAN9-207ENST00000539631 PJA2O43164 708 aa13.09□□□□□ -0.31
TSPAN9-207ENST00000539631 ARHGAP6O43182 974 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms