RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 MCOLN3Q8TDD5 553 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 C18orf25Q96B23 403 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TMEM159Q96B96 161 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ACOX2Q99424 681 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PHACTR1Q9C0D0 580 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TMEM39AQ9NV64 488 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CROTQ9UKG9 612 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 NDUFAF1Q9Y375 327 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 BCL9O00512 1426 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 C15orf38-AP3S2A0A0A6YYH1 394 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CHADO15335 359 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CD3EAPO15446 510 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MSCO60682 206 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CABYRO75952 493 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 KRT75O95678 551 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 RAB14P61106 215 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 FSCN1Q16658 493 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ARMCX4Q5H9R4 360 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ARPINQ7Z6K5 226 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 USP6NLQ92738 828 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 GLMNQ92990 594 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PORCNQ9H237 461 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CATSPERZQ9NTU4 200 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TRPC4Q9UBN4 977 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 C3P01024 1663 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ATP6V1B1P15313 513 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 AKAP5P24588 427 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 FASTKQ14296 549 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TRIM71Q2Q1W2 868 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MTDHQ86UE4 582 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PALB2Q86YC2 1186 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ARHGEF19Q8IW93 802 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 NSMCE2Q96MF7 247 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 APOL2Q9BQE5 337 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 POPDC2Q9HBU9 364 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 VPS51Q9UID3 782 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ASTN2O75129 1339 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CYP3A7-CYP3A51PA0A087WV96 503 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CYP3A7P24462 503 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PLIN5Q00G26 463 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TBL3Q12788 808 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 C16orf72Q14CZ0 275 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MAP4K3Q8IVH8 894 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ZCCHC9Q8N567 271 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 EDEM1Q92611 657 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PHF21BQ96EK2 531 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MAGED4Q96JG8 741 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 APBA2Q99767 749 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 POLR1EQ9GZS1 481 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 XPNPEP3Q9NQH7 507 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 SAR1AQ9NR31 198 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 RABGEF1Q9UJ41 708 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ERI2A8K979 691 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 RAG1P15918 1043 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ATP6V1B2P21281 511 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ST13P50502 369 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 GRIK3Q13003 919 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 MSLNQ13421 630 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TRMT11Q7Z4G4 463 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 PSTKQ8IV42 348 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC103Q8IW40 242 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CSGALNACT1Q8TDX6 532 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 LENG9Q96B70 501 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SH3BP4Q9P0V3 963 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 PAIP2BQ9ULR5 123 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 PCDHA11Q9Y5I1 949 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SNX13Q9Y5W8 968 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 COL5A2P05997 1499 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC88AQ3V6T2 1871 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 COL3A1P02461 1466 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CCNT2O60583 730 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF682O95780 498 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 NUP62P37198 522 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CRYMQ14894 314 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ACOX1Q15067 660 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 PPM1LQ5SGD2 360 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CELF3Q5SZQ8 465 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ARMC12Q5T9G4 340 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TMC3Q7Z5M5 1100 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 METTL3Q86U44 580 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 GPSM1Q86YR5 675 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 FNDC5Q8NAU1 212 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 C19orf18Q8NEA5 215 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ACTRT2Q8TDY3 377 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 PNMA5Q96PV4 448 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TKTL2Q9H0I9 626 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 OSGEPL1Q9H4B0 414 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 EVA1BQ9NVM1 165 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 UBA2Q9UBT2 640 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 PARP4Q9UKK3 1724 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 FAM86B1E9PN63 330 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 WNT10BO00744 389 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZBTB14O43829 449 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 FAM86B2P0C5J1 330 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 AMPD1P23109 780 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ELK3P41970 407 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 RPL21P46778 160 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ANGPT1Q15389 498 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TRAF7Q6Q0C0 670 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms