RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 LRRC31Q6UY01 552 aa11.78□□□□□ -0.52
FAM60A-206ENST00000539409 BBS7Q8IWZ6 715 aa11.78□□□□□ -0.52
FAM60A-206ENST00000539409 C1orf54Q8WWF1 131 aa11.78□□□□□ -0.52
FAM60A-206ENST00000539409 RPGRIP1Q96KN7 1286 aa11.78□□□□□ -0.52
FAM60A-206ENST00000539409 ASB16Q96NS5 453 aa11.78□□□□□ -0.52
FAM60A-206ENST00000539409 FAM118BQ9BPY3 351 aa11.78□□□□□ -0.52
FAM60A-206ENST00000539409 PRDM16Q9HAZ2 1276 aa11.78□□□□□ -0.52
FAM60A-206ENST00000539409 MPP6Q9NZW5 540 aa11.78□□□□□ -0.52
FAM60A-206ENST00000539409 E2F8A0AVK6 867 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 GFRA2O00451 464 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 MFSD11O43934 449 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 SLU7O95391 586 aaKnown RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 MTHFRP42898 656 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 GBE1Q04446 702 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 C5orf22Q49AR2 442 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 TMCO3Q6UWJ1 677 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 NPNTQ6UXI9 565 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 NLRP14Q86W24 1093 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 LGI2Q8N0V4 545 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 DEFB123Q8N688 67 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 NPWQ8N729 165 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 C12orf50Q8NA57 414 aaPredicted RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 NOA1Q8NC60 698 aaKnown RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 ACTL9Q8TC94 416 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 SMARCD2Q92925 531 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 RSPRY1Q96DX4 576 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 RPRD1AQ96P16 312 aaPredicted RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 ZYG11BQ9C0D3 744 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 DDX47Q9H0S4 455 aaKnown RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 POMKQ9H5K3 350 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 STIM2Q9P246 746 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 CDH7Q9ULB5 785 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 ZNF510Q9Y2H8 683 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 DRGXA6NNA5 263 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 CCDC188H7C350 402 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 TRDMT1O14717 391 aaKnown RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 PHF2O75151 1096 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 CNTN5O94779 1100 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 ZFXP17010 805 aaPredicted RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 SGSHP51688 502 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 VCPP55072 806 aaKnown RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 OTUD4Q01804 1114 aaKnown RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 PAFAH1B3Q15102 231 aaKnown RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 CCDC85BQ15834 202 aaPredicted RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 ALFQ53S48 1182 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 C1orf228Q6PIY5 440 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 CIR1Q86X95 450 aaPredicted RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 CELF5Q8N6W0 485 aaKnown RBP11.77□□□□□ -0.53
FAM60A-206ENST00000539409 LRRC3BQ96PB8 259 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 CATSPERBQ9H7T0 1116 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 DTLQ9NZJ0 730 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 ZNF212Q9UDV6 495 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 CD207Q9UJ71 328 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 HEY1Q9Y5J3 304 aa11.77□□□□□ -0.53
FAM60A-206ENST00000539409 H3BQ06 376 aaPredicted RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 FOSL2P15408 326 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 RHOQP17081 205 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 FCARP24071 287 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 SLC10A2Q12908 348 aaPredicted RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 NOMO1Q15155 1222 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 CCNG2Q16589 344 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 TTC27Q6P3X3 843 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 CFAP52Q8N1V2 620 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 RTL3Q8N8U3 475 aaKnown RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 SLC35B2Q8TB61 432 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 SUSD6Q92537 303 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 P3H4Q92791 437 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 MYADMQ96S97 322 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 DDX50Q9BQ39 737 aaKnown RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 KLC2Q9H0B6 622 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 LRRC19Q9H756 370 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 TRPV4Q9HBA0 871 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 NDFIP2Q9NV92 336 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 USP15Q9Y4E8 981 aaPredicted RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 LIASO43766 372 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 MAP3K6O95382 1288 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 VIPR2P41587 438 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 RPS24P62847 133 aaKnown RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 RABGAP1LQ5R372 815 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 TFAP2DQ7Z6R9 452 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 KLHL7Q8IXQ5 586 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 CPXM2Q8N436 756 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 P2RY11Q96G91 374 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 NECTIN4Q96NY8 510 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 OLFM3Q96PB7 478 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 UBE2ZQ9H832 354 aaPredicted RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 HOMER3Q9NSC5 361 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 TMEM248Q9NWD8 314 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 DNPEPQ9ULA0 475 aa11.76□□□□□ -0.53
FAM60A-206ENST00000539409 ZFP37Q9Y6Q3 630 aaPredicted RBP11.76□□□□□ -0.53
FAM60A-206ENST00000539409 KIF26AQ9ULI4 1882 aaPredicted RBP11.75□□□□□ -0.53
FAM60A-206ENST00000539409 TSPAN3O60637 253 aa11.75□□□□□ -0.53
FAM60A-206ENST00000539409 CHRNA3P32297 505 aa11.75□□□□□ -0.53
FAM60A-206ENST00000539409 NR2C2P49116 596 aa11.75□□□□□ -0.53
FAM60A-206ENST00000539409 SNX1Q13596 522 aa11.75□□□□□ -0.53
FAM60A-206ENST00000539409 DRICH1Q6PGQ1 229 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms