RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ATP6V0D2Q8N8Y2 350 aa19.73■□□□□ 0.75
TNFRSF1A-212ENST00000539372 OR2I1PQ8NGU4 316 aa19.73■□□□□ 0.75
TNFRSF1A-212ENST00000539372 GPT2Q8TD30 523 aa19.73■□□□□ 0.75
TNFRSF1A-212ENST00000539372 TTC17Q96AE7 1141 aa19.73■□□□□ 0.75
TNFRSF1A-212ENST00000539372 NUP58Q9BVL2 599 aa19.73■□□□□ 0.75
TNFRSF1A-212ENST00000539372 ASNSD1Q9NWL6 643 aa19.73■□□□□ 0.75
TNFRSF1A-212ENST00000539372 SLC12A6Q9UHW9 1150 aa19.73■□□□□ 0.75
TNFRSF1A-212ENST00000539372 CEP83Q9Y592 693 aa19.73■□□□□ 0.75
TNFRSF1A-212ENST00000539372 KCNU1A8MYU2 1149 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 F5H5T6 163 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 IGLV3-19P01714 112 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 EEF1GP26641 437 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 NUMBP49757 651 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 BPIFB4P59827 614 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 RPS14P62263 151 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 NME3Q13232 169 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 PLEKHG6Q3KR16 790 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 PITRM1Q5JRX3 1037 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 DCAF12L1Q5VU92 463 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 TAF3Q5VWG9 929 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 CIR1Q86X95 450 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 MIR1-1HGQ9H1L0 117 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 PDCL3Q9H2J4 239 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 PI4KAP42356 2102 aa19.72■□□□□ 0.75
TNFRSF1A-212ENST00000539372 ARHGAP33O14559 1287 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 DAB1O75553 588 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 UCHL3P15374 230 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 CYP11B1P15538 503 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 GNSP15586 552 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 ABCB4P21439 1286 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 CCR1P32246 355 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 CTSOP43234 321 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 SNX16P57768 344 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 ST8SIA6P61647 398 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 SLC6A3Q01959 620 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 CT47A1Q5JQC4 288 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 SMYD5Q6GMV2 418 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 DEFB124Q8NES8 71 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 CADM4Q8NFZ8 388 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 ENOX1Q8TC92 643 aaKnown RBP19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 MYO19Q96H55 970 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 MRGPRX3Q96LB0 322 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 PRMT1Q99873 361 aaKnown RBP19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 NAA15Q9BXJ9 866 aaKnown RBP19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 KIAA1522Q9P206 1035 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 SUSD2Q9UGT4 822 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 SUN2Q9UH99 717 aa19.71■□□□□ 0.75
TNFRSF1A-212ENST00000539372 ADAMTS9Q9P2N4 1935 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 ASLP04424 464 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 SLC2A3P11169 496 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 PMLP29590 882 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 RNASE9P60153 205 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 SLC26A9Q7LBE3 791 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 DHX40Q8IX18 779 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 APCDD1Q8J025 514 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 HDDC3Q8N4P3 179 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 ZCCHC9Q8N567 271 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 MINDY1Q8N5J2 469 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 TMEM35BQ8NCS4 154 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 GBP4Q96PP9 640 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 VPS16Q9H269 839 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 FBRSQ9HAH7 460 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 ERVW-1Q9UQF0 538 aa19.7■□□□□ 0.74
TNFRSF1A-212ENST00000539372 METTL12A8MUP2 240 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 M0QYT0 321 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 SIN3BO75182 1162 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 MOCS3O95396 460 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 DNTTP04053 509 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 SYPP08247 313 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 CSRP1P21291 193 aaKnown RBP19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 ACSL1P33121 698 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 GGCXP38435 758 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 KLK7P49862 253 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 CENPCQ03188 943 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 ZNF252P-AS1Q0IIN9 211 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 KRT31Q15323 416 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 ZNF776Q68DI1 518 aaPredicted RBP19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 NOP9Q86U38 636 aaKnown RBP19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 DNASE2BQ8WZ79 361 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 SNX19Q92543 992 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 C6orf106Q9H6K1 298 aaPredicted RBP19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 EIF2B4Q9UI10 523 aaKnown RBP19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 PCDH15Q96QU1 1955 aa19.69■□□□□ 0.74
TNFRSF1A-212ENST00000539372 TTC34A8MYJ7 566 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 F8VZ95 297 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 OPHN1O60890 802 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 CEACAM1P13688 526 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 PDGFRAP16234 1089 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 TFE3P19532 575 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 CDH5P33151 784 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 NOS2P35228 1153 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 IRAK1P51617 712 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 ECT2LQ008S8 904 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 AUHQ13825 339 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 HNRNPA1L2Q32P51 320 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 C2CD6Q53TS8 623 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 RABGAP1LQ5R372 815 aa19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 OTUD1Q5VV17 481 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF1A-212ENST00000539372 CDKAL1Q5VV42 579 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms