RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 TCEAL4Q96EI5 215 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 GUCD1Q96NT3 240 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 CYP2S1Q96SQ9 504 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 GKN1Q9NS71 199 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 CFAP97Q9P2B7 532 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 AMACRQ9UHK6 382 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 XPO7Q9UIA9 1087 aaKnown RBP15.88■□□□□ 0.13
VAMP1-207ENST00000539047 SNX10Q9Y5X0 201 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 EYSQ5T1H1 3165 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 I6L893 689 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-207ENST00000539047 SGK1O00141 431 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 NDC80O14777 642 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 DCLK1O15075 740 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 RAD51CO43502 376 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 MFSD11O43934 449 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 HEXIM1O94992 359 aaKnown RBP15.87■□□□□ 0.13
VAMP1-207ENST00000539047 RBP3P10745 1247 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 PECAM1P16284 738 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-207ENST00000539047 CEBPBP17676 345 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 IGFBP4P22692 258 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 CCR2P41597 374 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 NTHL1P78549 312 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 RBM10P98175 930 aaKnown RBP15.87■□□□□ 0.13
VAMP1-207ENST00000539047 ADCY2Q08462 1091 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 ELF2Q15723 593 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 SLC5A9Q2M3M2 681 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 STXBP5Q5T5C0 1151 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 GPR149Q86SP6 731 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 ZC3H18Q86VM9 953 aaKnown RBP15.87■□□□□ 0.13
VAMP1-207ENST00000539047 RTL3Q8N8U3 475 aaKnown RBP15.87■□□□□ 0.13
VAMP1-207ENST00000539047 HJURPQ8NCD3 748 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-207ENST00000539047 ING5Q8WYH8 240 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 SLCO2A1Q92959 643 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 RIPOR3Q96MK2 946 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 SLC22A12Q96S37 553 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 FAM118BQ9BPY3 351 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 LRRC1Q9BTT6 524 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 SLC46A2Q9BY10 475 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 BRD8Q9H0E9 1235 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 TDP1Q9NUW8 608 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 DNPEPQ9ULA0 475 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 DRG1Q9Y295 367 aaKnown RBP15.87■□□□□ 0.13
VAMP1-207ENST00000539047 NR2E1Q9Y466 385 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 NOTCH4Q99466 2003 aa15.87■□□□□ 0.13
VAMP1-207ENST00000539047 MYO7AQ13402 2215 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 IGLV3-10A0A075B6K4 115 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 E2F8A0AVK6 867 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 TTI1O43156 1089 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 GLP2RO95838 553 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 CYBBP04839 570 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 CHKAP35790 457 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 MAPKAPK2P49137 400 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 ATAT1Q5SQI0 421 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 NPNTQ6UXI9 565 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 JAMLQ86YT9 394 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 IFT20Q8IY31 132 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 SLC35B2Q8TB61 432 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 SH3RF2Q8TEC5 729 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 TFB1MQ8WVM0 346 aaKnown RBP15.86■□□□□ 0.13
VAMP1-207ENST00000539047 ZFRQ96KR1 1074 aaKnown RBP15.86■□□□□ 0.13
VAMP1-207ENST00000539047 MAGEB5Q9BZ81 275 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 ARGLU1Q9NWB6 273 aaPredicted RBP15.86■□□□□ 0.13
VAMP1-207ENST00000539047 CLDND1Q9NY35 253 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 ASIC3Q9UHC3 531 aa15.86■□□□□ 0.13
VAMP1-207ENST00000539047 AGO1Q9UL18 857 aaKnown RBP15.86■□□□□ 0.13
VAMP1-207ENST00000539047 WASH4PA8MWX3 477 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 LEFTY2O00292 366 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 SLC9A3R1O14745 358 aaPredicted RBP15.85■□□□□ 0.13
VAMP1-207ENST00000539047 MTSS1O43312 755 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 STIP1P31948 543 aaKnown RBP15.85■□□□□ 0.13
VAMP1-207ENST00000539047 GBE1Q04446 702 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 ADAM15Q13444 863 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 SLC45A4Q5BKX6 768 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 HEATR6Q6AI08 1181 aaKnown RBP15.85■□□□□ 0.13
VAMP1-207ENST00000539047 NADSYN1Q6IA69 706 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 FBXL22Q6P050 247 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 TTC27Q6P3X3 843 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 HTR3DQ70Z44 454 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 GET4Q7L5D6 327 aaPredicted RBP15.85■□□□□ 0.13
VAMP1-207ENST00000539047 ZDHHC14Q8IZN3 488 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 ATPAF2Q8N5M1 289 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 CCNYQ8ND76 341 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 QKIQ96PU8 341 aaKnown RBP eCLIP15.85■□□□□ 0.13
VAMP1-207ENST00000539047 PRMT1Q99873 361 aaKnown RBP15.85■□□□□ 0.13
VAMP1-207ENST00000539047 APOL5Q9BWW9 433 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 TMEM248Q9NWD8 314 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 DTLQ9NZJ0 730 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 TBC1D14Q9P2M4 693 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 SAE1Q9UBE0 346 aaPredicted RBP15.85■□□□□ 0.13
VAMP1-207ENST00000539047 SHROOM3Q8TF72 1996 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 DOCK6Q96HP0 2047 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 PRUNE2Q8WUY3 3088 aa15.85■□□□□ 0.13
VAMP1-207ENST00000539047 CDH23Q9H251 3354 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 A0A1B0GVM2 712 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 TCAF2A6NFQ2 919 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 ARHGAP42A6NI28 874 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 LINC01565O15544 149 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 MOSPD3O75425 235 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 ERLIN1O75477 346 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 CLDN11O75508 207 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms