RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 AFF3P51826 1226 aaKnown RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 MARSP56192 900 aaKnown RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 RPS24P62847 133 aaKnown RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 KCNH2Q12809 1159 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 BECN1Q14457 450 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 HLA-BQ31612 363 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 TTC31Q49AM3 519 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 ZNF776Q68DI1 518 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 BEND5Q7L4P6 421 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 GLRX5Q86SX6 157 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 TAC4Q86UU9 113 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 SCUBE3Q8IX30 993 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 BAHD1Q8TBE0 780 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 ADAM32Q8TC27 787 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 BIRC7Q96CA5 298 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 SLC39A13Q96H72 371 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 DDX50Q9BQ39 737 aaKnown RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 BTBD1Q9H0C5 482 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 INTS2Q9H0H0 1204 aaKnown RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 NUCKS1Q9H1E3 243 aaKnown RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 RSPH9Q9H1X1 276 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 MTG2Q9H4K7 406 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 TM7SF3Q9NS93 570 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 STIM2Q9P246 746 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 INTS6Q9UL03 887 aaKnown RBP12.98□□□□□ -0.33
VAMP1-206ENST00000538970 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 TLR6Q9Y2C9 796 aa12.98□□□□□ -0.33
VAMP1-206ENST00000538970 BIN1O00499 593 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 GNA14O95837 355 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 AFPP02771 609 aaKnown RBP12.97□□□□□ -0.33
VAMP1-206ENST00000538970 ASLP04424 464 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 CSKP41240 450 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 CSNK1EP49674 416 aaKnown RBP12.97□□□□□ -0.33
VAMP1-206ENST00000538970 PAK1Q13153 545 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 MEA1Q16626 185 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 KIF19Q2TAC6 998 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 HNRNPA1L2Q32P51 320 aaKnown RBP12.97□□□□□ -0.33
VAMP1-206ENST00000538970 MS4A13Q5J8X5 152 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 DENND1BQ6P3S1 775 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 CARNMT1Q8N4J0 409 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 PNPLA1Q8N8W4 532 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 SETD7Q8WTS6 366 aaKnown RBP12.97□□□□□ -0.33
VAMP1-206ENST00000538970 STK32AQ8WU08 396 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 FAM149B1Q96BN6 582 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 MRGPRX3Q96LB0 322 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 SLC4A5Q9BY07 1137 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 SGK2Q9HBY8 427 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 TM9SF3Q9HD45 589 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 SUN2Q9UH99 717 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 CYTH4Q9UIA0 394 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 PCDHGB2Q9Y5G2 931 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
VAMP1-206ENST00000538970 PCNX2A6NKB5 2137 aa12.97□□□□□ -0.33
VAMP1-206ENST00000538970 E5RJQ4 531 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 FLRT2O43155 660 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 PAPSS1O43252 624 aaPredicted RBP12.96□□□□□ -0.33
VAMP1-206ENST00000538970 SIN3BO75182 1162 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 FSBPO95073 299 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 LUC7L3O95232 432 aaKnown RBP12.96□□□□□ -0.33
VAMP1-206ENST00000538970 MOCS2O96007 188 aaPredicted RBP12.96□□□□□ -0.33
VAMP1-206ENST00000538970 KRT5P13647 590 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 CD27P26842 260 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 ACADSBP45954 432 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 GRIA4P48058 902 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 STX17P56962 302 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 ST8SIA6P61647 398 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 CDH18Q13634 790 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 ARID5BQ14865 1188 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 DCAF6Q58WW2 860 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 FSCBQ5H9T9 825 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 PITRM1Q5JRX3 1037 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 SYPL2Q5VXT5 272 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 LAYNQ6UX15 382 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 DBX2Q6ZNG2 339 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 USP30Q70CQ3 517 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 CFAP52Q8N1V2 620 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 KDM1BQ8NB78 822 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 ORAI3Q9BRQ5 295 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 TRIM62Q9BVG3 475 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 PABPC3Q9H361 631 aaKnown RBP12.96□□□□□ -0.33
VAMP1-206ENST00000538970 XPO7Q9UIA9 1087 aaKnown RBP12.96□□□□□ -0.33
VAMP1-206ENST00000538970 SCML1Q9UN30 329 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 APOBEC2Q9Y235 224 aaKnown RBP12.96□□□□□ -0.33
VAMP1-206ENST00000538970 SNX11Q9Y5W9 270 aa12.96□□□□□ -0.33
VAMP1-206ENST00000538970 ITIH6Q6UXX5 1313 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 CAPN9O14815 690 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 MED7O43513 233 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 LETM1O95202 739 aaPredicted RBP12.95□□□□□ -0.34
VAMP1-206ENST00000538970 IGLV3-25P01717 112 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 APOEP02649 317 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 IGHV4-34P06331 123 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 CTSOP43234 321 aaPredicted RBP12.95□□□□□ -0.34
VAMP1-206ENST00000538970 TEAD4Q15561 434 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 RAP1GAP2Q684P5 730 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 TMEM110Q86TL2 294 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 SLCO6A1Q86UG4 719 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 CHSY1Q86X52 802 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms