RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 C3orf20Q8ND61 904 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 SLC20A1Q8WUM9 679 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 HMGB4Q8WW32 186 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 CPA5Q8WXQ8 436 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 BAP1Q92560 729 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 RNF34Q969K3 372 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 MRGPRX1Q96LB2 322 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 SYT11Q9BT88 431 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 NUP58Q9BVL2 599 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 CIPCQ9C0C6 399 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 PCED1AQ9H1Q7 454 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 VPS45Q9NRW7 570 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 CACNA2D2Q9NY47 1150 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 DLL3Q9NYJ7 618 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 USP36Q9P275 1121 aaKnown RBP12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 SYCE3A1L190 88 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 TEX33O43247 280 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 AP5Z1O43299 807 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 CLDN11O75508 207 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 GRAP2O75791 330 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 MOCS2O96007 188 aaPredicted RBP12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 OXTRP30559 389 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 FLT3P36888 993 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 PTPN9P43378 593 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 SGSHP51688 502 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 NRG1Q02297 640 aaPredicted RBP12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 DEUP1Q05D60 604 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 LMAN2Q12907 356 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 PTP4A2Q12974 167 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 AUHQ13825 339 aaKnown RBP12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 PTPRNQ16849 979 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 FUT11Q495W5 492 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 OTUD1Q5VV17 481 aaPredicted RBP12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 PEAR1Q5VY43 1037 aaPredicted RBP12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 RAP1GAP2Q684P5 730 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 KIAA1211LQ6NV74 962 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 FBXL22Q6P050 247 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 STRADAQ7RTN6 431 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 RABEPKQ7Z6M1 372 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 KIAA2013Q8IYS2 634 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 OR2T3Q8NH03 318 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 NETO1Q8TDF5 533 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 AGPAT1Q99943 283 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 TPSD1Q9BZJ3 242 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 TTYH3Q9C0H2 523 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 CBX8Q9HC52 389 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 PARD6AQ9NPB6 346 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 ITM2CQ9NQX7 267 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 PIGVQ9NUD9 493 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 CALCOCO1Q9P1Z2 691 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 SCML1Q9UN30 329 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 TBC1D30Q9Y2I9 924 aa12.71□□□□□ -0.37
CLTCL1-205ENST00000538828 MUC22E2RYF6 1773 aaPredicted RBP12.71□□□□□ -0.38
CLTCL1-205ENST00000538828 CACNA1EQ15878 2313 aa12.71□□□□□ -0.38
CLTCL1-205ENST00000538828 IGLV3-10A0A075B6K4 115 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 A0A1W2PQJ5 194 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 TARSL2A2RTX5 802 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 SIGLEC16A6NMB1 481 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 DRGXA6NNA5 263 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 WASH3PC4AMC7 463 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 H0Y626 953 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 PAGE1O75459 146 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 SERPINC1P01008 464 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 GZMAP12544 262 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 CD70P32970 193 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 RDXP35241 583 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 MPLP40238 635 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 SULT1E1P49888 294 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 CDH4P55283 916 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 FOXK2Q01167 660 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 SPEM2Q0P670 501 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 SFSWAPQ12872 951 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 NME3Q13232 169 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 PUM1Q14671 1186 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 LPAL2Q16609 132 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 PLEKHG6Q3KR16 790 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 PRR23CQ6ZRP0 262 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 MMS22LQ6ZRQ5 1243 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 MON1BQ7L1V2 547 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 ERMP1Q7Z2K6 904 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 ZNF683Q8IZ20 524 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 CCAR2Q8N163 923 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 PGBD3Q8N328 593 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 CADM4Q8NFZ8 388 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 WFDC5Q8TCV5 224 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 CENPIQ92674 756 aaPredicted RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 SYN2Q92777 582 aaPredicted RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 PCDHB18PQ96TA0 734 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 PRDM16Q9HAZ2 1276 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 ZDHHC4Q9NPG8 344 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 EVLQ9UI08 416 aaPredicted RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 INTS6Q9UL03 887 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 HS3ST4Q9Y661 456 aa12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 BZW2Q9Y6E2 419 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-205ENST00000538828 DOCK4Q8N1I0 1966 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms