RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 DLX2Q07687 328 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 KLF1Q13351 362 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 AUHQ13825 339 aaKnown RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 DPYSQ14117 519 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 CBX2Q14781 532 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 SIX1Q15475 284 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 NCBP2-AS2Q69YL0 99 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 RFWD3Q6PCD5 774 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 ZNF572Q7Z3I7 529 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 CIR1Q86X95 450 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 NPAS3Q8IXF0 933 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 PQLC3Q8N755 202 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 MAGOHBQ96A72 148 aaKnown RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 PABPC5Q96DU9 382 aaKnown RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 RPGRIP1Q96KN7 1286 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 CCDC114Q96M63 670 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 KRT12Q99456 494 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 DDX50Q9BQ39 737 aaKnown RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 DDX47Q9H0S4 455 aaKnown RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 ADAM7Q9H2U9 754 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 CATSPERBQ9H7T0 1116 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 ETNK2Q9NVF9 386 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 ZMYM5Q9UJ78 669 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 AGO1Q9UL18 857 aaKnown RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 CCL26Q9Y258 94 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 EFR3BQ9Y2G0 817 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 HEY1Q9Y5J3 304 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 SPTBN4Q9H254 2564 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 PTPRZ1P23471 2315 aaPredicted RBP14.57□□□□□ -0.08
CD4-208ENST00000538827 C19orf67A6NJJ6 358 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 CCDC188H7C350 402 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 FGF10O15520 208 aaPredicted RBP14.57□□□□□ -0.08
CD4-208ENST00000538827 TSPAN3O60637 253 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 MAP3K6O95382 1288 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 PAPLNO95428 1278 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 KLKB1P03952 638 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 TGM2P21980 687 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 IL4RP24394 825 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 SLC6A4P31645 630 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 HTR7P34969 479 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 IRAK1P51617 712 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 OTUD4Q01804 1114 aaKnown RBP14.57□□□□□ -0.08
CD4-208ENST00000538827 NRG1Q02297 640 aaPredicted RBP14.57□□□□□ -0.08
CD4-208ENST00000538827 ITIH3Q06033 890 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 USP4Q13107 963 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 RABGAP1LQ5R372 815 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 ATAT1Q5SQI0 421 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 MANEALQ5VSG8 457 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 SLC9A4Q6AI14 798 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 TMCO3Q6UWJ1 677 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 BMP8AQ7Z5Y6 402 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 TFAP2DQ7Z6R9 452 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 PRELID2Q8N945 189 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 TTC13Q8NBP0 860 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 P3H4Q92791 437 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 USP13Q92995 863 aaPredicted RBP14.57□□□□□ -0.08
CD4-208ENST00000538827 RIPOR3Q96MK2 946 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 ZSWIM3Q96MP5 696 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 IRF2BPLQ9H1B7 796 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 TDP1Q9NUW8 608 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 MPP6Q9NZW5 540 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 SAE1Q9UBE0 346 aaPredicted RBP14.57□□□□□ -0.08
CD4-208ENST00000538827 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.57□□□□□ -0.08
CD4-208ENST00000538827 NEU3Q9UQ49 428 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 NR2E1Q9Y466 385 aa14.57□□□□□ -0.08
CD4-208ENST00000538827 V9GYY5 206 aaPredicted RBP14.57□□□□□ -0.08
CD4-208ENST00000538827 SHROOM3Q8TF72 1996 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 TYW5A2RUC4 315 aaKnown RBP14.56□□□□□ -0.08
CD4-208ENST00000538827 SOBPA7XYQ1 873 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 APOC4-APOC2K7ER74 178 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 MCF2LO15068 1137 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 DCLK1O15075 740 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 GFRA3O60609 400 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 LATS1O95835 1130 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 APOC2P02655 101 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 GBP2P32456 591 aaPredicted RBP14.56□□□□□ -0.08
CD4-208ENST00000538827 MTHFRP42898 656 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 MLLT6P55198 1093 aaPredicted RBP14.56□□□□□ -0.08
CD4-208ENST00000538827 ZXDBP98169 803 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 GBE1Q04446 702 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 ZP2Q05996 745 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 FAM133BQ5BKY9 247 aaKnown RBP14.56□□□□□ -0.08
CD4-208ENST00000538827 C8orf74Q6P047 294 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 FBXL22Q6P050 247 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 BBS7Q8IWZ6 715 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 ZDHHC14Q8IZN3 488 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 CCDC33Q8N5R6 958 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 PLD5Q8N7P1 536 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 NOA1Q8NC60 698 aaKnown RBP14.56□□□□□ -0.08
CD4-208ENST00000538827 NETO2Q8NC67 525 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 PRSS33Q8NF86 280 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 ACTL9Q8TC94 416 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 FGF13Q92913 245 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 IGSF8Q969P0 613 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 C1orf74Q96LT6 269 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 PRICKLE1Q96MT3 831 aaPredicted RBP14.56□□□□□ -0.08
CD4-208ENST00000538827 PRMT1Q99873 361 aaKnown RBP14.56□□□□□ -0.08
CD4-208ENST00000538827 ZYG11BQ9C0D3 744 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 KIF9Q9HAQ2 790 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms