RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-222	ENST00000538689	SCAMP5	Q8TAC9	235 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	TRIM43	Q96BQ3	446 aa	Predicted RBP	7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	C9orf72	Q96LT7	481 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	STMN4	Q9H169	189 aa	Predicted RBP	7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	HIPK3	Q9H422	1215 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	TMPRSS4	Q9NRS4	437 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	ETNK2	Q9NVF9	386 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	SLC12A6	Q9UHW9	1150 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	LTBP2	Q14767	1821 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	TCRBV7S3A2	A0A539	114 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	HACD1	B0YJ81	288 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	HAX1	O00165	279 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	GCAT	O75600	419 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	DGKI	O75912	1065 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	IGLV3-25	P01717	112 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	IVL	P07476	585 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	OR4Q2	P0C623	313 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	MAGEA6	P43360	314 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	RGS19	P49795	217 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	IRAK1	P51617	712 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	SLC5A3	P53794	718 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	ARL4C	P56559	192 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	PPP2R2A	P63151	447 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	PDIA2	Q13087	525 aa	Known RBP	7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	STAT4	Q14765	748 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	FASTKD3	Q14CZ7	662 aa	Known RBP	7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	LONRF1	Q17RB8	773 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	TCTN1	Q2MV58	587 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	RFX8	Q6ZV50	586 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	ZBED8	Q8IZ13	594 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	C7orf61	Q8IZ16	206 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	PDIK1L	Q8N165	341 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	QKI	Q96PU8	341 aa	Known RBP eCLIP	7.26	□□□□□ -1.25	2e-20	■■□□□ 12.4
FDFT1-222	ENST00000538689	CCDC77	Q9BR77	488 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	MRPL9	Q9BYD2	267 aa	Known RBP	7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	GPR62	Q9BZJ7	368 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	WDCP	Q9H6R7	721 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	ANLN	Q9NQW6	1124 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	ABCC13	Q9NSE7	274 aa		7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	XPO7	Q9UIA9	1087 aa	Known RBP	7.26	□□□□□ -1.25
FDFT1-222	ENST00000538689	NUP205	Q92621	2012 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689		A0A087WUV0	522 aa	Predicted RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	C5orf60	A6NFR6	353 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	OR6C75	A6NL08	312 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	SMIM23	A6NLE4	172 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FAM72C	H0Y354	149 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	GOLGA8M	H3BSY2	632 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	EEF2K	O00418	725 aa	Known RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	DCLK1	O15075	740 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	CDH16	O75309	829 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	TMEM63A	O94886	807 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	MAP3K6	O95382	1288 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FGFR3	P22607	806 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	MDH1	P40925	334 aa	Known RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	MMP13	P45452	471 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	SLCO1A2	P46721	670 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	GATM	P50440	423 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	MMP16	P51512	607 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	IFI35	P80217	286 aa	Predicted RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	GAD2	Q05329	585 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	ELAVL2	Q12926	359 aa	Known RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	PAFAH1B3	Q15102	231 aa	Known RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	PDK1	Q15118	436 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FNBP1L	Q5T0N5	605 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FAM72A	Q5TYM5	149 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FAM171A1	Q5VUB5	890 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FAM72D	Q6L9T8	149 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	LEKR1	Q6ZMV7	388 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FAM72B	Q86X60	149 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	TFB1M	Q8WVM0	346 aa	Known RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	ANAPC16	Q96DE5	110 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	SCLY	Q96I15	445 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	C8orf48	Q96LL4	319 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	FRMD8	Q9BZ67	464 aa	Predicted RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	KLC2	Q9H0B6	622 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	CNOT10	Q9H9A5	744 aa	Known RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	ETNK1	Q9HBU6	452 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	RAB6B	Q9NRW1	208 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	TMEM51	Q9NW97	253 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	ABI2	Q9NYB9	513 aa	Predicted RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	OR12D3	Q9UGF7	316 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	LGALS13	Q9UHV8	139 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	PCDHB5	Q9Y5E4	795 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	TANC1	Q9C0D5	1861 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	MICAL3	Q7RTP6	2002 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	CDH23	Q9H251	3354 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689		E7EVH7	732 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	MFSD11	O43934	449 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	AMH	P03971	560 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	GALT	P07902	379 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	ATP5D	P30049	168 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	MAGEA11	P43364	429 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	SLC11A1	P49279	550 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	ST13	P50502	369 aa	Known RBP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	CCL23	P55773	120 aa		7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	YWHAG	P61981	247 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
FDFT1-222	ENST00000538689	GNGT1	P63211	74 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms