RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ALKAL1Q6UXT8 129 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 ARHGAP24Q8N264 748 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PLD6Q8N2A8 252 aaKnown RBP12.28□□□□□ -0.44
CPNE8-203ENST00000538596 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPNE8-203ENST00000538596 AGAP2Q99490 1192 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 CAB39LQ9H9S4 337 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 ANLNQ9NQW6 1124 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PPM1HQ9ULR3 514 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 ENO4A6NNW6 628 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 M0QYT0 321 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PIRO00625 290 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 MMP3P08254 477 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PGAM1P18669 254 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 TYK2P29597 1187 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 FDFT1P37268 417 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 ITGA9Q13797 1035 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 HIC1Q14526 733 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 DLG2Q15700 870 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 SLC25A52Q3SY17 297 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 CMPK2Q5EBM0 449 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 RABGAP1LQ5R372 815 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PID1Q7Z2X4 250 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 ZNF410Q86VK4 478 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 WDR75Q8IWA0 830 aaKnown RBP12.28□□□□□ -0.44
CPNE8-203ENST00000538596 CRYBG2Q8N1P7 616 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PHC3Q8NDX5 983 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 RAB3IL1Q8TBN0 382 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 AGR3Q8TD06 166 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 CDKL2Q92772 493 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 GCOM2Q9BZD3 368 aaPredicted RBP12.28□□□□□ -0.44
CPNE8-203ENST00000538596 FAM124BQ9H5Z6 455 aaPredicted RBP12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PIGVQ9NUD9 493 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 COL1A2P08123 1366 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 A0A088AWK7 358 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 I6L893 689 aaPredicted RBP12.28□□□□□ -0.44
CPNE8-203ENST00000538596 SIN3BO75182 1162 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 GLRA3O75311 464 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 ZMPSTE24O75844 475 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PROCP04070 461 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 ANPEPP15144 967 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 CD1EP15812 388 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 FASTKD5Q7L8L6 764 aaKnown RBP12.28□□□□□ -0.44
CPNE8-203ENST00000538596 STRADAQ7RTN6 431 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 APOL2Q9BQE5 337 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 GORASP1Q9BQQ3 440 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 VTA1Q9NP79 307 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 PIN4Q9Y237 131 aaKnown RBP12.28□□□□□ -0.44
CPNE8-203ENST00000538596 LOC100653049A0A140TA62 436 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 CCDC78A2IDD5 438 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 ARHGAP42A6NI28 874 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 GOLGA8TH3BQL2 631 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 KRT34O76011 436 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 PDE5AO76074 875 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 RPL34P49207 117 aaKnown RBP12.27□□□□□ -0.45
CPNE8-203ENST00000538596 ACTR3P61158 418 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 MRPS35P82673 323 aaKnown RBP12.27□□□□□ -0.45
CPNE8-203ENST00000538596 USP4Q13107 963 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 NOTUMQ6P988 496 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 NET1Q7Z628 596 aaPredicted RBP12.27□□□□□ -0.45
CPNE8-203ENST00000538596 ACVR1CQ8NER5 493 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 APPL2Q8NEU8 664 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 GPRC5AQ8NFJ5 357 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 OR6J1Q8NGC5 347 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 LENG1Q96BZ8 264 aaPredicted RBP12.27□□□□□ -0.45
CPNE8-203ENST00000538596 PPP1R12CQ9BZL4 782 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 CYP4F11Q9HBI6 524 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 MAN1C1Q9NR34 630 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 LRCH1Q9Y2L9 728 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 DERAQ9Y315 318 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 MAP3K7O43318 606 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 CIB2O75838 187 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 MLNP12872 115 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 SP100P23497 879 aaPredicted RBP12.27□□□□□ -0.45
CPNE8-203ENST00000538596 CNTFP26441 200 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 IDH3AP50213 366 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 EPHB1P54762 984 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 IRF9Q00978 393 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 RNF220Q5VTB9 566 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 NAIF1Q69YI7 327 aaPredicted RBP12.27□□□□□ -0.45
CPNE8-203ENST00000538596 CYS1Q717R9 158 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 DCLK2Q8N568 766 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 B3GALNT2Q8NCR0 500 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 ARRDC4Q8NCT1 418 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.45
CPNE8-203ENST00000538596 SNX15Q9NRS6 342 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 COPG2Q9UBF2 871 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 ZNF212Q9UDV6 495 aa12.27□□□□□ -0.45
CPNE8-203ENST00000538596 APOBEC2Q9Y235 224 aaKnown RBP12.27□□□□□ -0.45
CPNE8-203ENST00000538596 HACD1B0YJ81 288 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 NRP1O14786 923 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 OPHN1O60890 802 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 SERPINE1P05121 402 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 SKIP12755 728 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 AOC1P19801 751 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 NCF2P19878 526 aaPredicted RBP12.26□□□□□ -0.45
CPNE8-203ENST00000538596 IFRD2Q12894 506 aaPredicted RBP12.26□□□□□ -0.45
CPNE8-203ENST00000538596 EFHC1Q5JVL4 640 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 NAPRTQ6XQN6 538 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 PAQR9Q6ZVX9 377 aa12.26□□□□□ -0.45
CPNE8-203ENST00000538596 MYLK4Q86YV6 388 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms