RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 DEUP1Q05D60 604 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 FRG1Q14331 258 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 PDK1Q15118 436 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 FSCN1Q16658 493 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 MDH1BQ5I0G3 518 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 SYCP2LQ5T4T6 812 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 TRMT10BQ6PF06 316 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 KLHDC8BQ8IXV7 354 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.51□□□□□ -0.89
DDB1-211ENST00000538280 COLGALT1Q8NBJ5 622 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 RNF169Q8NCN4 708 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 ACMSDQ8TDX5 336 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 ARNTL2Q8WYA1 636 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 NDRG1Q92597 394 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 TTC17Q96AE7 1141 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 SKA1Q96BD8 255 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 STAMBPL1Q96FJ0 436 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 SENP8Q96LD8 212 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 C7orf26Q96N11 449 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 FAM111AQ96PZ2 611 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 RAB3IPQ96QF0 476 aaPredicted RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 SRPK1Q96SB4 655 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 SMOQ99835 787 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 SYT15Q9BQS2 421 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 TSSK1BQ9BXA7 367 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 UPF3AQ9H1J1 476 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 TSPYL2Q9H2G4 693 aaPredicted RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 UGT1A7Q9HAW7 530 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 UGT1A10Q9HAW8 530 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 UGT1A8Q9HAW9 530 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 KCNK13Q9HB14 408 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 LRRC4Q9HBW1 653 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 CSNK1G1Q9HCP0 422 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 WDR6Q9NNW5 1121 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 CNGB3Q9NQW8 809 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 CHST12Q9NRB3 414 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 RRN3Q9NYV6 651 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 SIRPGQ9P1W8 387 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 RPL26L1Q9UNX3 145 aaKnown RBP9.51□□□□□ -0.89
DDB1-211ENST00000538280 TRIM33Q9UPN9 1127 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 CDY2AQ9Y6F7 541 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 NLRC5Q86WI3 1866 aa9.51□□□□□ -0.89
DDB1-211ENST00000538280 WDR91A4D1P6 747 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 M0QYT0 321 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 RNF103O00237 685 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 NRP1O14786 923 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 PPP1R12AO14974 1030 aaPredicted RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 BIRC5O15392 142 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 DUSP11O75319 330 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 STK10O94804 968 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 RPLP2P05387 115 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 DLDP09622 509 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 AKR1A1P14550 325 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 PGAM1P18669 254 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 COL9A1P20849 921 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 BGNP21810 368 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 IGFBP6P24592 240 aaPredicted RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 ACAT1P24752 427 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 CRHR1P34998 444 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 ADRA1BP35368 520 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 MAGEA12P43365 314 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 NDUFV1P49821 464 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 TKTL1P51854 596 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 FPGSQ05932 587 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 PPIDQ08752 370 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 ADGRE1Q14246 886 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 TEX44Q53QW1 395 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 DCAF6Q58WW2 860 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 FAM182AQ5T1J6 154 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 SYPL2Q5VXT5 272 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 TWF2Q6IBS0 349 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 DENND5BQ6ZUT9 1274 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 RFX8Q6ZV50 586 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 C16orf59Q7L2K0 433 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 CLNKQ7Z7G1 428 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 CTAGE3PQ8IX95 158 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 ZNF567Q8N184 647 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 SIX6OS1Q8N1H7 587 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 KIF2BQ8N4N8 673 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 IRGQQ8WZA9 623 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 ISL2Q96A47 359 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 FAM149B1Q96BN6 582 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 THOC1Q96FV9 657 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 P2RY11Q96G91 374 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 ZFP42Q96MM3 310 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 GORASP1Q9BQQ3 440 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 MTG1Q9BT17 334 aaPredicted RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 NAT9Q9BTE0 207 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 TRIM55Q9BYV6 548 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 ULBP1Q9BZM6 244 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 BRD8Q9H0E9 1235 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 PRDM12Q9H4Q4 367 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 EBF2Q9HAK2 575 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 NPHS2Q9NP85 383 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 KRT82Q9NSB4 513 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 PIGVQ9NUD9 493 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 FAM105AQ9NUU6 356 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms