RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 KIAA0319Q5VV43 1072 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SYPL2Q5VXT5 272 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 OVOS1Q6IE37 1185 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NAPEPLDQ6IQ20 393 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 TIGD7Q6NT04 549 aaPredicted RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 KYAT3Q6YP21 454 aaKnown RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 OTOAQ7RTW8 1153 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 ECHDC2Q86YB7 292 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SPATA2LQ8IUW3 424 aaPredicted RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 DCP1BQ8IZD4 617 aaKnown RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 ZNF567Q8N184 647 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 PYROXD2Q8N2H3 581 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 AGGF1Q8N302 714 aaeCLIP6.81□□□□□ -1.32
USP28-206ENST00000538224 FITM2Q8N6M3 262 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 C3orf58Q8NDZ4 430 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 ZMIZ2Q8NF64 920 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 GABPB2Q8TAK5 448 aaPredicted RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 PPP1R13LQ8WUF5 828 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 LPPQ93052 612 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 RNF34Q969K3 372 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 FUBP3Q96I24 572 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP28-206ENST00000538224 SERAC1Q96JX3 654 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 C7orf26Q96N11 449 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SERPINB11Q96P15 392 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 FAM111AQ96PZ2 611 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 HAPLN3Q96S86 360 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SRPK1Q96SB4 655 aaKnown RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 LGMNQ99538 433 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 CPNE1Q99829 537 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 ADAM2Q99965 735 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 TSEN34Q9BSV6 310 aaKnown RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 FTHL17Q9BXU8 183 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SMOC2Q9H3U7 446 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 RNF19AQ9NV58 838 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 COX16Q9P0S2 106 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SEPT10Q9P0V9 454 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 KANSL3Q9P2N6 904 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 MID2Q9UJV3 735 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 RPL26L1Q9UNX3 145 aaKnown RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 PLLPQ9Y342 182 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 MEIS3P2A8K0S8 358 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 IRAK2O43187 625 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 TIMM44O43615 452 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 MGRN1O60291 552 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 DNAJC6O75061 913 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 RFPL1O75677 317 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 WFS1O76024 890 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 ANXA9O76027 345 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 IGLV3-25P01717 112 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 FYNP06241 537 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 CSH1P0DML2 217 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 CSH2P0DML3 217 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 PRKAR2AP13861 404 aaKnown RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 PTPN3P26045 913 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 HOXC13P31276 330 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 CCR1P32246 355 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 GP5P40197 560 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 NDUFV1P49821 464 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 ARFIP2P53365 341 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 CSE1LP55060 971 aaKnown RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 PITX1P78337 314 aaPredicted RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 ELF3P78545 371 aaPredicted RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 YWHAHQ04917 246 aaPredicted RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 PRKCZQ05513 592 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 CACNB2Q08289 660 aaPredicted RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 ITGA7Q13683 1181 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 TBCCQ15814 346 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 KCNA10Q16322 511 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 SPRED3Q2MJR0 410 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 ANO4Q32M45 955 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 GRTP1Q5TC63 336 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 BSPRYQ5W0U4 402 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 BTBD8Q5XKL5 378 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 FAM91A1Q658Y4 838 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 PACS1Q6VY07 963 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 SH2D5Q6ZV89 423 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 HFE2Q6ZVN8 426 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 NLRP9Q7RTR0 991 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 BHLHA9Q7RTU4 235 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 PID1Q7Z2X4 250 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 PRPF39Q86UA1 669 aaKnown RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 TAC4Q86UU9 113 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 LCA5Q86VQ0 697 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 RASSF3Q86WH2 238 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 CCDC117Q8IWD4 279 aaPredicted RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 ATPAF2Q8N5M1 289 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 PDCD7Q8N8D1 485 aaKnown RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
USP28-206ENST00000538224 RNF169Q8NCN4 708 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 DQX1Q8TE96 717 aaKnown RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 PTCD2Q8WV60 388 aaKnown RBP6.8□□□□□ -1.32
USP28-206ENST00000538224 ERP27Q96DN0 273 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 TBC1D31Q96DN5 1066 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 CERS2Q96G23 380 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 RMDN2Q96LZ7 410 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 TSGA13Q96PP4 275 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 TMEM237Q96Q45 408 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 PKMYT1Q99640 499 aa6.8□□□□□ -1.32
USP28-206ENST00000538224 RTP3Q9BQQ7 232 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms