RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 HMGN5P82970 282 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ATP2C1P98194 919 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TAP1Q03518 808 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CEBPZQ03701 1054 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LAMTOR4Q0VGL1 99 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MAPK7Q13164 816 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PPIGQ13427 754 aaKnown RBP eCLIP2.77□□□□□ -1.973e-8■■□□□ 13.4
TNFRSF1A-210ENST00000537842 ADAM15Q13444 863 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 BFSP2Q13515 415 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PDIA5Q14554 519 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 STARD3Q14849 445 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ACAP1Q15027 740 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PCOLCEQ15113 449 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TAF11Q15544 211 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TMEM119Q4V9L6 283 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 XKR3Q5GH77 459 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZNF484Q5JVG2 852 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ATAT1Q5SQI0 421 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZBTB41Q5SVQ8 909 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CFAP58Q5T655 872 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SPATA1Q5VX52 437 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 IZUMO3Q5VZ72 239 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NCAPH2Q6IBW4 605 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RETSATQ6NUM9 610 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MIS18BP1Q6P0N0 1132 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 UNQ6494/PRO21346Q6UXR6 183 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ARHGEF18Q6ZSZ5 1173 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ESPNLQ6ZVH7 1005 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 C1orf186Q6ZWK4 172 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LARP4Q71RC2 724 aaKnown RBP eCLIP2.77□□□□□ -1.971e-7■□□□□ 11.3
TNFRSF1A-210ENST00000537842 MAEAQ7L5Y9 396 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DAAM2Q86T65 1068 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FAM228AQ86W67 206 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CDR2LQ86X02 465 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PHYKPLQ8IUZ5 450 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HERC6Q8IVU3 1022 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 C4orf19Q8IY42 314 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LGI4Q8N135 537 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KLHL36Q8N4N3 616 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TMEM199Q8N511 208 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DEFB123Q8N688 67 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MYCT1Q8N699 235 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 METTL13Q8N6R0 699 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FAM184AQ8NB25 1140 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZNF527Q8NB42 609 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FAM156AQ8NDB6 213 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RDM1Q8NG50 284 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CAGE1Q8TC20 777 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PRPF31Q8WWY3 499 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 WASF1Q92558 559 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GCDHQ92947 438 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HPS3Q969F9 1004 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TOP1MTQ969P6 601 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZNF689Q96CS4 500 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FOXRED1Q96CU9 486 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TMEM176AQ96HP8 235 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 C16orf92Q96LL3 132 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TEKT5Q96M29 485 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RIPOR3Q96MK2 946 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GNRHR2Q96P88 292 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TAAR9Q96RI9 348 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 USP28Q96RU2 1077 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FIZ1Q96SL8 496 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CDX2Q99626 313 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FOXB1Q99853 325 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DPYSL5Q9BPU6 564 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KIFC3Q9BVG8 833 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TEKT3Q9BXF9 490 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 EIF2AQ9BY44 585 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SEZ6LQ9BYH1 1024 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PANK2Q9BZ23 570 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 WDR12Q9GZL7 423 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HAPLN2Q9GZV7 340 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 QRSL1Q9H0R6 528 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 XYLT2Q9H1B5 865 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 AZI2Q9H6S1 392 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CERS4Q9HA82 394 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ERVK-5Q9HDB9 667 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 BLOC1S4Q9NUP1 217 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 POLR3BQ9NW08 1133 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ARGLU1Q9NWB6 273 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DNAJC28Q9NX36 388 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MIOSQ9NXC5 875 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 USP36Q9P275 1121 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 Q9UFV3 132 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PCDHA12Q9UN75 941 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GINS2Q9Y248 185 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NR2E1Q9Y466 385 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KAT6AQ92794 2004 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KDM3AQ9Y4C1 1321 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RIF1Q5UIP0 2472 aaKnown RBP2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 A0A087WZ62 844 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 A0A1B0GVC2 190 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 A0A1W2PPC1 479 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 VPS37CA5D8V6 355 aaPredicted RBP2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 VWA3AA6NCI4 1184 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 F8W810 466 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FFAR2O15552 330 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms