RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GRTP1Q5TC63 336 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 ZFP1Q6P2D0 407 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 FBXL19Q6PCT2 694 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 EPGNQ6UW88 154 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 C16orf89Q6UX73 402 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 FRMD7Q6ZUT3 714 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 SETD3Q86TU7 594 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-218ENST00000537641 RSPH3Q86UC2 560 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 ZDHHC17Q8IUH5 632 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 SREK1Q8WXA9 508 aaKnown RBP12.47□□□□□ -0.41
CPSF7-218ENST00000537641 DGCR14Q96DF8 476 aaKnown RBP12.47□□□□□ -0.41
CPSF7-218ENST00000537641 DCUN1D1Q96GG9 259 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 PIWIL1Q96J94 861 aaKnown RBP12.47□□□□□ -0.41
CPSF7-218ENST00000537641 PRICKLE1Q96MT3 831 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-218ENST00000537641 SPATA13Q96N96 652 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 MMP19Q99542 508 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 TRIM56Q9BRZ2 755 aaKnown RBP12.47□□□□□ -0.41
CPSF7-218ENST00000537641 UBE2OQ9C0C9 1292 aaKnown RBP12.47□□□□□ -0.41
CPSF7-218ENST00000537641 ASB7Q9H672 318 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 CYP4F11Q9HBI6 524 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 RBPJLQ9UBG7 517 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 STK39Q9UEW8 545 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 MID2Q9UJV3 735 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 VPS28Q9UK41 221 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 EVPLQ92817 2033 aa12.47□□□□□ -0.41
CPSF7-218ENST00000537641 WDR27A2RRH5 827 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 A6NJR5 290 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 TXNDC9O14530 226 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 SLC22A2O15244 555 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.41
CPSF7-218ENST00000537641 PFKMP08237 780 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 MCF2P10911 925 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 ADORA2AP29274 412 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 RPL5P46777 297 aaKnown RBP12.46□□□□□ -0.41
CPSF7-218ENST00000537641 OSTNP61366 133 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 GBE1Q04446 702 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 KYAT1Q16773 422 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 LRRC36Q1X8D7 754 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 GOLGA7BQ2TAP0 167 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 TMEM259Q4ZIN3 620 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 SPANXN3Q5MJ09 141 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 SH2D4BQ5SQS7 431 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 RARS2Q5T160 578 aaKnown RBP12.46□□□□□ -0.41
CPSF7-218ENST00000537641 JADE1Q6IE81 842 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 TMC7Q7Z402 723 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 TRIM50Q86XT4 487 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 HPS6Q86YV9 775 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 AHI1Q8N157 1196 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 CCDC124Q96CT7 223 aaKnown RBP12.46□□□□□ -0.41
CPSF7-218ENST00000537641 CDCA5Q96FF9 252 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 MROH8Q9H579 483 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 TXNRD2Q9NNW7 524 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 INPP5FQ9Y2H2 1132 aa12.46□□□□□ -0.41
CPSF7-218ENST00000537641 LACTBL1A8MY62 500 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 KPNA7A9QM74 516 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 GRAP2O75791 330 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 DGKIO75912 1065 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 TMCC1O94876 653 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 ETS2P15036 469 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 CPA3P15088 417 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 NCF2P19878 526 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 SCNN1AP37088 669 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 HSPA13P48723 471 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 SERPINB8P50452 374 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 NDST1P52848 882 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 HDAC4P56524 1084 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 MBTD1Q05BQ5 628 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 ADGRE1Q14246 886 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 FRG1Q14331 258 aaKnown RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 HSP90AA5PQ58FG0 334 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 TCHHL1Q5QJ38 904 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 ARMC3Q5W041 872 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 MAP1SQ66K74 1059 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 KCNT2Q6UVM3 1135 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 FASTKD5Q7L8L6 764 aaKnown RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 SATL1Q86VE3 508 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 LRRC71Q8N4P6 559 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 HTR3CQ8WXA8 447 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 HPDLQ96IR7 371 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 CNDP1Q96KN2 507 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 SPATA33Q96N06 139 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 CPNE1Q99829 537 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 NT5C1AQ9BXI3 368 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 R3HDMLQ9H3Y0 253 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 SMARCAD1Q9H4L7 1026 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 ZNF696Q9H7X3 374 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 PRMT7Q9NVM4 692 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 TMEM216Q9P0N5 145 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 RNF181Q9P0P0 153 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 TXNDC16Q9P2K2 825 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 PLXNB2O15031 1838 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 STRNO43815 780 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 STK10O94804 968 aaKnown RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 SORBS2O94875 1100 aaKnown RBP12.45□□□□□ -0.42
CPSF7-218ENST00000537641 MAP3K6O95382 1288 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 HSPA4LO95757 839 aa12.45□□□□□ -0.42
CPSF7-218ENST00000537641 ASLP04424 464 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms