RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 IRAK1P51617 712 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 TSR1Q2NL82 804 aaKnown RBP23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 RABGAP1LQ5R372 815 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 TTC39BQ5VTQ0 682 aaPredicted RBP23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 CARNMT1Q8N4J0 409 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 ZNF557Q8N988 423 aaPredicted RBP23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 C1orf74Q96LT6 269 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 RPRD1AQ96P16 312 aaPredicted RBP23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 ACOX2Q99424 681 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 CHP1Q99653 195 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 FAM126AQ9BYI3 521 aaPredicted RBP23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 TRIM7Q9C029 511 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 ELOVL2Q9NXB9 296 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 GGA2Q9UJY4 613 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 TIMM44O43615 452 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 HNRNPLP14866 589 aaKnown RBP eCLIP23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 ADRA1BP35368 520 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 LMAN2Q12907 356 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 CDH18Q13634 790 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 EIF4HQ15056 248 aaKnown RBP23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 FSCBQ5H9T9 825 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 CCDC122Q5T0U0 273 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 ACBD5Q5T8D3 534 aaPredicted RBP23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 TRMT11Q7Z4G4 463 aaKnown RBP23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 ADIPOR2Q86V24 386 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 TC2NQ8N9U0 490 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 SORCS1Q8WY21 1168 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 HHIPQ96QV1 700 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 THAP2Q9H0W7 228 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 ZSCAN32Q9NX65 697 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 MYO1AQ9UBC5 1043 aa23.46■■□□□ 1.35
SFSWAP-204ENST00000535399 A0A1B0GVM2 712 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 TCAF2A6NFQ2 919 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 GFPT1Q06210 699 aaPredicted RBP23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 ZNF252P-AS1Q0IIN9 211 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 CRY1Q16526 586 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 SLC18A3Q16572 532 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 EOGTQ5NDL2 527 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 TMEM92Q6UXU6 159 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 CHST9Q7L1S5 443 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 AHI1Q8N157 1196 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 CCAR2Q8N163 923 aaKnown RBP23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 CAMKK1Q8N5S9 505 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 CCDC185Q8N715 623 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 ZBTB44Q8NCP5 570 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 THAP10Q9P2Z0 257 aaPredicted RBP23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 INTS6Q9UL03 887 aaKnown RBP23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 SCINQ9Y6U3 715 aa23.45■■□□□ 1.34
SFSWAP-204ENST00000535399 IGLV3-10A0A075B6K4 115 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 DRGXA6NNA5 263 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 H0Y626 953 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 NTSR1P30989 418 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 NBL1P41271 181 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 WASP42768 502 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 FNTBP49356 437 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 NRLP54845 237 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 ARL13BQ3SXY8 428 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 FUT11Q495W5 492 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 CHPFQ8IZ52 775 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 FNIP1Q8TF40 1166 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 UCMAQ8WVF2 138 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 NTAN1Q96AB6 310 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 GABRG3Q99928 467 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 CIPCQ9C0C6 399 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 MRPL47Q9HD33 250 aaKnown RBP23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 CACNA2D2Q9NY47 1150 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 PCDHGA2Q9Y5H1 932 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 R4GN57 208 aa23.44■■□□□ 1.34
SFSWAP-204ENST00000535399 E9PAM4 449 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 CNTN5O94779 1100 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 APBB3O95704 486 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 CYP1A2P05177 515 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 PSMA2P25787 234 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 PXNP49023 591 aaPredicted RBP23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 GALCP54803 685 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 NRG1Q02297 640 aaPredicted RBP23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 ENPP2Q13822 863 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 ALFQ53S48 1182 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 MBLAC2Q68D91 279 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 HEATR6Q6AI08 1181 aaKnown RBP23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 CXorf57Q6NSI4 855 aaKnown RBP23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 CCDC117Q8IWD4 279 aaPredicted RBP23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 ARFGAP1Q8N6T3 406 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 ARHGEF26Q96DR7 871 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 PHOX2BQ99453 314 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 OSBPL2Q9H1P3 480 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 DEF6Q9H4E7 631 aa23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 NHEJ1Q9H9Q4 299 aaPredicted RBP23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 KIAA1522Q9P206 1035 aaPredicted RBP23.43■■□□□ 1.34
SFSWAP-204ENST00000535399 NPC1O15118 1278 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 LILRB5O75023 590 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 CLDN11O75508 207 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 DGKEP52429 567 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 SCAPQ12770 1279 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 ZNF234Q14588 700 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 MANEALQ5VSG8 457 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 LRRC31Q6UY01 552 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 WDR5BQ86VZ2 330 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 TSTD1Q8NFU3 115 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 TTC17Q96AE7 1141 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms