RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZNF347Q96SE7 839 aa5.73□□□□□ -1.49
PRKDC-205ENST00000535375 PIMREGQ9BSJ6 248 aa5.73□□□□□ -1.49
PRKDC-205ENST00000535375 AAMDCQ9H7C9 122 aa5.73□□□□□ -1.49
PRKDC-205ENST00000535375 SEMA4BQ9NPR2 832 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-205ENST00000535375 PLCB1Q9NQ66 1216 aa5.73□□□□□ -1.49
PRKDC-205ENST00000535375 LIN7CQ9NUP9 197 aaKnown RBP5.73□□□□□ -1.49
PRKDC-205ENST00000535375 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.73□□□□□ -1.49
PRKDC-205ENST00000535375 MSRB1Q9NZV6 116 aa5.73□□□□□ -1.49
PRKDC-205ENST00000535375 ANAPC4Q9UJX5 808 aa5.73□□□□□ -1.49
PRKDC-205ENST00000535375 COG5Q9UP83 839 aa5.73□□□□□ -1.49
PRKDC-205ENST00000535375 CNTN6Q9UQ52 1028 aa5.73□□□□□ -1.49
PRKDC-205ENST00000535375 TRBV5-3A0A0A0MS03 114 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 KIR2DS5A0A0G2JLQ3 304 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 IGLV5-39A0A0G2JS06 123 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 CCDC194A0A1B0GVG4 234 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 KIR2DS3K7RE56 304 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 CRYABP02511 175 aaKnown RBP5.72□□□□□ -1.49
PRKDC-205ENST00000535375 PEPDP12955 493 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 PGM5Q15124 567 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 BTBD16Q32M84 506 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 C10orf76Q5T2E6 689 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 KLHL17Q6TDP4 642 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 B4GALNT4Q76KP1 1039 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 CYB5R4Q7L1T6 521 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 CCDC117Q8IWD4 279 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-205ENST00000535375 ADGRF3Q8IZF5 1079 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 ATG16L2Q8NAA4 619 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 OR52N4Q8NGI2 321 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 IGFBPL1Q8WX77 278 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 CENPIQ92674 756 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-205ENST00000535375 EID2BQ96D98 161 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 RTKNQ9BST9 563 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 CRB3Q9BUF7 120 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 MECRQ9BV79 373 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 KATNAL1Q9BW62 490 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 THSD1Q9NS62 852 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 HERC5Q9UII4 1024 aaKnown RBP5.72□□□□□ -1.49
PRKDC-205ENST00000535375 TNFSF13BQ9Y275 285 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 DAAM1Q9Y4D1 1078 aa5.72□□□□□ -1.49
PRKDC-205ENST00000535375 LMTK3Q96Q04 1460 aa5.71□□□□□ -1.49
PRKDC-205ENST00000535375 F5H423 210 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-205ENST00000535375 TLX3O43711 291 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-205ENST00000535375 SNHG28P0DPA3 235 aa5.71□□□□□ -1.5
PRKDC-205ENST00000535375 IGFBP2P18065 325 aa5.71□□□□□ -1.5
PRKDC-205ENST00000535375 FOXL2P58012 376 aa5.71□□□□□ -1.5
PRKDC-205ENST00000535375 RPS6KA2Q15349 733 aa5.71□□□□□ -1.5
PRKDC-205ENST00000535375 TBRG1Q3YBR2 411 aa5.71□□□□□ -1.5
PRKDC-205ENST00000535375 RINLQ6ZS11 566 aa5.71□□□□□ -1.5
PRKDC-205ENST00000535375 SLC25A28Q96A46 364 aa5.71□□□□□ -1.5
PRKDC-205ENST00000535375 MPHOSPH6Q99547 160 aaKnown RBP5.71□□□□□ -1.5
PRKDC-205ENST00000535375 OSBPL5Q9H0X9 879 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-205ENST00000535375 LRFN1Q9P244 771 aa5.71□□□□□ -1.5
PRKDC-205ENST00000535375 CYP3A7-CYP3A51PA0A087WV96 503 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 MBD3L5A6NJ08 208 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-205ENST00000535375 CD8B2A6NJW9 211 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 SLC38A8A6NNN8 435 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 RHODO00212 210 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 ACTL6BO94805 426 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 NDUFB8O95169 186 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 GYS1P13807 737 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 CYP3A7P24462 503 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 GAD2Q05329 585 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 FHL1Q13642 323 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 INPP5JQ15735 1006 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-205ENST00000535375 GPR162Q16538 588 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 SMTNL2Q2TAL5 461 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 TRIM60Q495X7 471 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 ERAP2Q6P179 960 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 NFRKBQ6P4R8 1299 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 RAB11FIP2Q7L804 512 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 TRAPPC11Q7Z392 1133 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 VPS37AQ8NEZ2 397 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 LTV1Q96GA3 475 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-205ENST00000535375 ADAD1Q96M93 576 aaKnown RBP5.7□□□□□ -1.5
PRKDC-205ENST00000535375 SORBS1Q9BX66 1292 aaKnown RBP5.7□□□□□ -1.5
PRKDC-205ENST00000535375 MLXIPQ9HAP2 919 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 LAMP3Q9UQV4 416 aa5.7□□□□□ -1.5
PRKDC-205ENST00000535375 TMEM272A0A1B0GTI8 110 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 A0A1W2PPC1 479 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 FAM90A10PA6NDY2 464 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 B4DGG1 531 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 ZNF814B7Z6K7 855 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 SYT5O00445 386 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 PCP4P48539 62 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 FAM3BP58499 235 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-205ENST00000535375 AP2B1P63010 937 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 OS9Q13438 667 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-205ENST00000535375 GALNT3Q14435 633 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 PRTGQ2VWP7 1150 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 LEXMQ3ZCV2 418 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 PIK3CD-AS1Q5SR53 167 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 C6orf10Q5SRN2 563 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 DAB2IPQ5VWQ8 1189 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 RFX8Q6ZV50 586 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 DDIASQ8IXT1 998 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 PAQR4Q8N4S7 273 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-205ENST00000535375 TMEM199Q8N511 208 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 SAMD3Q8N6K7 520 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 CPT1BQ92523 772 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 CLMNQ96JQ2 1002 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms