RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 MGAT3Q09327 533 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 TFDP1Q14186 410 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 GPNMBQ14956 572 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 NR1D2Q14995 579 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 SOWAHAQ2M3V2 549 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 PPP2R2DQ66LE6 453 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 PRELID2Q8N945 189 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CALML6Q8TD86 181 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 C1orf54Q8WWF1 131 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 RSPH1Q8WYR4 309 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 FBXL8Q96CD0 374 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 KIF12Q96FN5 646 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 B3GNT5Q9BYG0 378 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 NUF2Q9BZD4 464 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 ADAM7Q9H2U9 754 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 TPK1Q9H3S4 243 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 PLGRKTQ9HBL7 147 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 DPP3Q9NY33 737 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 GTF2IRD1Q9UHL9 959 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 ANAPC7Q9UJX3 599 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 IPPQ9Y573 584 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CAPN8A6NHC0 703 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 ZBBXA8MT70 800 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CNOT3O75175 753 aaKnown RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CILPO75339 1184 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 BEST1O76090 585 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CHEK2O96017 543 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 GZMAP12544 262 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CCNB1P14635 433 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 ENDOUP21128 410 aaKnown RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 SKIV2L2P42285 1042 aaKnown RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 RPL21P46778 160 aaKnown RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 NDST1P52848 882 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CETN1Q12798 172 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CTC1Q2NKJ3 1217 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 TRAF7Q6Q0C0 670 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 EXOC8Q8IYI6 725 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 TRABDQ9H4I3 376 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 NOL6Q9H6R4 1146 aaKnown RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CREBZFQ9NS37 354 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CDY2AQ9Y6F7 541 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 SMIM28A0A1B0GU29 152 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 ITGB1P05556 798 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CD48P09326 243 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 TAC1P20366 129 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 MMP8P22894 467 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 VEGFBP49765 207 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 IRX4P78413 519 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 TJAP1Q5JTD0 557 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 C10orf76Q5T2E6 689 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 LVRNQ6Q4G3 990 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CYP4V2Q6ZWL3 525 aaPredicted RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CATSPER4Q7RTX7 472 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 AMIGO2Q86SJ2 522 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 ENDOVQ8N8Q3 282 aaKnown RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 GAB3Q8WWW8 586 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 OMA1Q96E52 524 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 HPDLQ96IR7 371 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 PLEKHA5Q9HAU0 1116 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 SACM1LQ9NTJ5 587 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 DDX28Q9NUL7 540 aaKnown RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 SAE1Q9UBE0 346 aaPredicted RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 DAPK2Q9UIK4 370 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 PPM1HQ9ULR3 514 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 C1orf232A0A0U1RR37 186 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 PI4K2BG5E9Z4 385 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 I3L4J1 428 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 KLHL41O60662 606 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 MTA2O94776 668 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 AKR1A1P14550 325 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 VCLP18206 1134 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 PEX2P28328 305 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 ATXN1P54253 815 aaKnown RBP9.27□□□□□ -0.92
SF3B2-216ENST00000534765 HADHBP55084 474 aaKnown RBP9.27□□□□□ -0.92
SF3B2-216ENST00000534765 MAPK11Q15759 364 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 ANKDD1AQ495B1 522 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 WDR44Q5JSH3 913 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 PPP1R26Q5T8A7 1209 aaPredicted RBP9.27□□□□□ -0.92
SF3B2-216ENST00000534765 LHX8Q68G74 356 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 RTN4RL1Q86UN2 441 aaPredicted RBP9.27□□□□□ -0.92
SF3B2-216ENST00000534765 KLHDC9Q8NEP7 349 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 FLCNQ8NFG4 579 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 SKA1Q96BD8 255 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 SLC7A6OSQ96CW6 309 aaPredicted RBP9.27□□□□□ -0.92
SF3B2-216ENST00000534765 RBM15Q96T37 977 aaKnown RBP eCLIP9.27□□□□□ -0.923e-10■□□□□ 9.3
SF3B2-216ENST00000534765 RHOBTB2Q9BYZ6 727 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 FAM49BQ9NUQ9 324 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 ZNF229Q9UJW7 825 aa9.27□□□□□ -0.92
SF3B2-216ENST00000534765 TDRD15B5MCY1 1934 aaKnown RBP9.27□□□□□ -0.93
SF3B2-216ENST00000534765 DUSP11O75319 330 aaKnown RBP9.27□□□□□ -0.93
SF3B2-216ENST00000534765 GRAP2O75791 330 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 SRGAP2BP0DMP2 458 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 GRM5P41594 1212 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 TMEM132DQ14C87 1099 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 TCEAL1Q15170 157 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 ZNF362Q5T0B9 420 aaPredicted RBP9.27□□□□□ -0.93
SF3B2-216ENST00000534765 TMTC4Q5T4D3 741 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 CD300LGQ6UXG3 332 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 OSTM1Q86WC4 334 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms