RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PABPC3Q9H361 631 aaKnown RBP10.75□□□□□ -0.69
CSDE1-217ENST00000534699 ABCB8Q9NUT2 735 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.75□□□□□ -0.691e-8■□□□□ 9.6
CSDE1-217ENST00000534699 LIMA1Q9UHB6 759 aaKnown RBP10.75□□□□□ -0.69
CSDE1-217ENST00000534699 ERVW-1Q9UQF0 538 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 NAALADL1Q9UQQ1 740 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 FAM221BA6H8Z2 402 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 ENDOD1O94919 500 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 EPHX1P07099 455 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 PRKCHP24723 683 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 SLC6A4P31645 630 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 ETFBP38117 255 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 TPMTP51580 245 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 ATXN3P54252 364 aaPredicted RBP10.74□□□□□ -0.69
CSDE1-217ENST00000534699 RPS14P62263 151 aaKnown RBP10.74□□□□□ -0.69
CSDE1-217ENST00000534699 PTPRNQ16849 979 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 ARHGAP44Q17R89 818 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 ZNF423Q2M1K9 1284 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 INAVAQ3KP66 663 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 DCAF6Q58WW2 860 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 PITRM1Q5JRX3 1037 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 OXR1Q8N573 874 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 WDTC1Q8N5D0 677 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 CCDC114Q96M63 670 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 BPIFA3Q9BQP9 254 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 FAM204AQ9H8W3 233 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 PRSS16Q9NQE7 514 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 ANGPTL2Q9UKU9 493 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 MEI4A8MW99 385 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 SCAMP3O14828 347 aaKnown RBP10.74□□□□□ -0.69
CSDE1-217ENST00000534699 MAGEC1O60732 1142 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 ENGP17813 658 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 C5AR1P21730 350 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 HTR7P34969 479 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 GRIA4P48058 902 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 KRT83P78385 493 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 DRAP1Q14919 205 aaPredicted RBP10.74□□□□□ -0.69
CSDE1-217ENST00000534699 STX1AQ16623 288 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 FAM46CQ5VWP2 391 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 RNF219Q5W0B1 726 aaPredicted RBP10.74□□□□□ -0.69
CSDE1-217ENST00000534699 TMEM215Q68D42 235 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 SASS6Q6UVJ0 657 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 BNIPLQ7Z465 357 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 CHSY1Q86X52 802 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 PLPP6Q8IY26 295 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 TMEFF1Q8IYR6 380 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 DEFB106AQ8N104 65 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 NAT10Q9H0A0 1025 aaKnown RBP10.74□□□□□ -0.69
CSDE1-217ENST00000534699 BTBD1Q9H0C5 482 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 PLK2Q9NYY3 685 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 PPARGC1AQ9UBK2 798 aaKnown RBP10.74□□□□□ -0.69
CSDE1-217ENST00000534699 CYP8B1Q9UNU6 501 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 TBC1D30Q9Y2I9 924 aa10.74□□□□□ -0.69
CSDE1-217ENST00000534699 COL5A1P20908 1838 aaPredicted RBP10.74□□□□□ -0.69
CSDE1-217ENST00000534699 DRGXA6NNA5 263 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 C4orf47A7E2U8 309 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 FOXN3O00409 490 aaPredicted RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 MSI1O43347 362 aaKnown RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 ATP9BO43861 1147 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 UCHL3P15374 230 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 CYP11B1P15538 503 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 AIF1P55008 147 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 ECT2LQ008S8 904 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 KCNMA1Q12791 1236 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 SUZ12Q15022 739 aaKnown RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 PLEKHG6Q3KR16 790 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 DPCR1Q3MIW9 517 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 SLC25A52Q3SY17 297 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 SLC45A4Q5BKX6 768 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 OR6B2Q6IFH4 312 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 NEK5Q6P3R8 708 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 ERICH1Q86X53 443 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 SLC41A1Q8IVJ1 513 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 LGI2Q8N0V4 545 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 NDRG1Q92597 394 aaKnown RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 TOE1Q96GM8 510 aaKnown RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 PRICKLE1Q96MT3 831 aaPredicted RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 CPXM1Q96SM3 734 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 NCAPGQ9BPX3 1015 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 SYNCQ9H7C4 482 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 ZDHHC4Q9NPG8 344 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 DONSONQ9NYP3 566 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 CYTH4Q9UIA0 394 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 SLC25A13Q9UJS0 675 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 ZFHX2Q9C0A1 2572 aaPredicted RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 GVINP1Q7Z2Y8 2422 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 DCDC2BA2VCK2 349 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 LRRC72A6NJI9 287 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 E9PAM4 449 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 TRIM24O15164 1050 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 TSPAN3O60637 253 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 RNGTTO60942 597 aaKnown RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 CD27P26842 260 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 CSKP41240 450 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 IRX4P78413 519 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 LRRC31Q6UY01 552 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 DBX2Q6ZNG2 339 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 CLEC4CQ8WTT0 213 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 MRGPRX3Q96LB0 322 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms