RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ANKLE1Q8NAG6 615 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 GSDMBQ8TAX9 411 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 SLC44A1Q8WWI5 657 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 SCLYQ96I15 445 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 TSGA13Q96PP4 275 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 TRABDQ9H4I3 376 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 BACE2Q9Y5Z0 518 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 WASH4PA8MWX3 477 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 EFCAB14O75071 495 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 PAGE1O75459 146 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 SUN1O94901 812 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 HAPLN1P10915 354 aaPredicted RBP13.76□□□□□ -0.21
BEST1-208ENST00000534553 CCNCP24863 283 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 PTPN3P26045 913 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 CCT5P48643 541 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 TUFMP49411 452 aaKnown RBP13.76□□□□□ -0.21
BEST1-208ENST00000534553 CCL23P55773 120 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 TLE2Q04725 743 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 NAB1Q13506 487 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 SLC8B1Q6J4K2 584 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 TIGD7Q6NT04 549 aaPredicted RBP13.76□□□□□ -0.21
BEST1-208ENST00000534553 ZNF534Q76KX8 674 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 CPLX4Q7Z7G2 160 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 SLC26A11Q86WA9 606 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 LRRC6Q86X45 466 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 ZNF276Q8N554 614 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 NPWQ8N729 165 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 ATP6V0D2Q8N8Y2 350 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 FBXO32Q969P5 355 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 SLC39A13Q96H72 371 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
BEST1-208ENST00000534553 SIGLEC10Q96LC7 697 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 GBA3Q9H227 469 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 NMUR1Q9HB89 426 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 TBX21Q9UL17 535 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 SDR42E2A6NKP2 422 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 FAM155BO75949 473 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 SEC24CP53992 1094 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
BEST1-208ENST00000534553 IL9RQ01113 521 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 PRPSAP1Q14558 356 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 MGAT5BQ3V5L5 792 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 TEX44Q53QW1 395 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 GKAP1Q5VSY0 366 aaPredicted RBP13.75□□□□□ -0.21
BEST1-208ENST00000534553 RWDD4Q6NW29 188 aaKnown RBP13.75□□□□□ -0.21
BEST1-208ENST00000534553 ATAD1Q8NBU5 361 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 PDZD8Q8NEN9 1154 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 DCAKDQ8WVC6 231 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 OVCA2Q8WZ82 227 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 MTBPQ96DY7 904 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 PGLYRP2Q96PD5 576 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 ZNF317Q96PQ6 595 aaPredicted RBP13.75□□□□□ -0.21
BEST1-208ENST00000534553 PRMT1Q99873 361 aaKnown RBP13.75□□□□□ -0.21
BEST1-208ENST00000534553 PPP1R12CQ9BZL4 782 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 SEPT10Q9P0V9 454 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 MTRRQ9UBK8 725 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 SFMBT1Q9UHJ3 866 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 NEU3Q9UQ49 428 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 PCDHA11Q9Y5I1 949 aa13.75□□□□□ -0.21
BEST1-208ENST00000534553 ABHD14A-ACY1A0A1B0GW23 586 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 AVILO75366 819 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 KRT37O76014 449 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 ZWINTO95229 277 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 AP2A1O95782 977 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 EFEMP2O95967 443 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 PSMB4P28070 264 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 GATMP50440 423 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 MLLT6P55198 1093 aaPredicted RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 TBX4P57082 545 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 RING1Q06587 406 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 TRIP4Q15650 581 aaPredicted RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 TRIM60Q495X7 471 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 STEAP4Q687X5 459 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 IGDCC3Q8IVU1 814 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 ATPAF2Q8N5M1 289 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 FATE1Q969F0 183 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 STAMBPL1Q96FJ0 436 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 BTN2A3PQ96KV6 586 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 TTLL2Q9BWV7 592 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 RETREG1Q9H6L5 497 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
BEST1-208ENST00000534553 GMIPQ9P107 970 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 PPARGC1AQ9UBK2 798 aaKnown RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 STK39Q9UEW8 545 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 RSPH14Q9UHP6 348 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 MAD1L1Q9Y6D9 718 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 VWA8A3KMH1 1905 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 E9PAM4 449 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 TM9SF1O15321 606 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 AMHP03971 560 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 SRGAP2BP0DMP2 458 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 PGAM1P18669 254 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 CNTFP26441 200 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 SERPINB9P50453 376 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 SPARCL1Q14515 664 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 PKN2Q16513 984 aaKnown RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 TCTN1Q2MV58 587 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms