RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MSX2P35548 267 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-226ENST00000533820 PCLAFQ15004 111 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 EFHC1Q5JVL4 640 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 OLFML2BQ68BL8 750 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 RNF111Q6ZNA4 994 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 SULF1Q8IWU6 871 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 HTR3CQ8WXA8 447 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 IFT43Q96FT9 208 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 TRAPPC9Q96Q05 1148 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 ZNF670Q9BS34 389 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 SMARCAD1Q9H4L7 1026 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 SYBUQ9NX95 663 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 MOCS1Q9NZB8 636 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 GOLGA8QA0A0J9YX86 632 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 GOLGA8OA6NCC3 632 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 GOLGA8NF8WBI6 632 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 C22orf31O95567 290 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 PSMB4P28070 264 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 COPAP53621 1224 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 DLG2Q15700 870 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 PPP4R1Q8TF05 950 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 CAB39LQ9H9S4 337 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 TUBGCP4Q9UGJ1 667 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 GOLGA8TH3BQL2 631 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 GAS2O43903 313 aaKnown RBP19.84■□□□□ 0.77
CAPN1-226ENST00000533820 GCATO75600 419 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 ITGA2BP08514 1039 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 ATICP31939 592 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 MAGEA3P43357 314 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 IDH3AP50213 366 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 SERPINB9P50453 376 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 TUBB3Q13509 450 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 LRRC39Q96DD0 335 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 CAMKK2Q96RR4 588 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 TBCBQ99426 244 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 VPS33BQ9H267 617 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 MTMR10Q9NXD2 777 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 MFSD11O43934 449 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 HBP1O60381 514 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 OPHN1O60890 802 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 RABGGTBP53611 331 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 FAM91A1Q658Y4 838 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 PLPPR4Q7Z2D5 763 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 APLFQ8IW19 511 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-226ENST00000533820 TFB1MQ8WVM0 346 aaKnown RBP19.84■□□□□ 0.77
CAPN1-226ENST00000533820 ATP2A3Q93084 1043 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 APOL2Q9BQE5 337 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 VCX3BQ9H321 246 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 VCX3AQ9NNX9 186 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 CEP350Q5VT06 3117 aa19.84■□□□□ 0.77
CAPN1-226ENST00000533820 RNF103O00237 685 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 NEMP1O14524 444 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 BIRC5O15392 142 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 MCF2P10911 925 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 PEX2P28328 305 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 INCA1Q0VD86 236 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 CNPY1Q3B7I2 92 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 SFT2D3Q587I9 215 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 NCBP2-AS2Q69YL0 99 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 PDPK2PQ6A1A2 396 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 ASB7Q9H672 318 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 ADAMTS6Q9UKP5 1117 aa19.83■□□□□ 0.77
CAPN1-226ENST00000533820 USP2O75604 605 aaPredicted RBP19.83■□□□□ 0.76
CAPN1-226ENST00000533820 EML3Q32P44 896 aa19.83■□□□□ 0.76
CAPN1-226ENST00000533820 PLD6Q8N2A8 252 aaKnown RBP19.83■□□□□ 0.76
CAPN1-226ENST00000533820 SLC35F5Q8WV83 523 aa19.83■□□□□ 0.76
CAPN1-226ENST00000533820 CDKL2Q92772 493 aa19.83■□□□□ 0.76
CAPN1-226ENST00000533820 ZMAT2Q96NC0 199 aaKnown RBP19.83■□□□□ 0.76
CAPN1-226ENST00000533820 ELP3Q9H9T3 547 aa19.83■□□□□ 0.76
CAPN1-226ENST00000533820 S100A14Q9HCY8 104 aa19.83■□□□□ 0.76
CAPN1-226ENST00000533820 SNTG2Q9NY99 539 aa19.83■□□□□ 0.76
CAPN1-226ENST00000533820 TMCO1Q9UM00 188 aa19.83■□□□□ 0.76
CAPN1-226ENST00000533820 LMO2P25791 158 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 TRIP10Q15642 601 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 ZNF618Q5T7W0 954 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 KYAT3Q6YP21 454 aaKnown RBP19.82■□□□□ 0.76
CAPN1-226ENST00000533820 FRMD7Q6ZUT3 714 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 MOB2Q70IA6 237 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 MDM4O15151 490 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 RALBP11234 206 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 NAT1P18440 290 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 AOC1P19801 751 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 KIZQ2M2Z5 673 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 RABGAP1LQ5R372 815 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 ARCQ7LC44 396 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 SLC35B4Q969S0 331 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 SORT1Q99523 831 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 SUN2Q9UH99 717 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 GLRA3O75311 464 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 AQP4P55087 323 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 TNFAIP2Q03169 654 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 NME3Q13232 169 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 GRAMD1BQ3KR37 738 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.82■□□□□ 0.762e-9■□□□□ 10
CAPN1-226ENST00000533820 ADAM32Q8TC27 787 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 P2RY11Q96G91 374 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 QKIQ96PU8 341 aaKnown RBP eCLIP19.82■□□□□ 0.766e-6■■■■□ 20.5
CAPN1-226ENST00000533820 AGAP2Q99490 1192 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 SLC4A5Q9BY07 1137 aa19.82■□□□□ 0.76
CAPN1-226ENST00000533820 DGKIO75912 1065 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms