RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 ZNF135P52742 658 aaPredicted RBP16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 CDH4P55283 916 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 SEMA3BQ13214 749 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 UBXN2BQ14CS0 331 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 FBXO43Q4G163 708 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 DGKKQ5KSL6 1271 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 FSTL4Q6MZW2 842 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 NUDT18Q6ZVK8 323 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 MFN1Q8IWA4 741 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 CCDC117Q8IWD4 279 aaPredicted RBP16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 SYNPOQ8N3V7 929 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 PJA1Q8NG27 643 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 TEKT4Q8WW24 435 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 PBXIP1Q96AQ6 731 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 ARHGEF4Q9NR80 690 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 SALL4Q9UJQ4 1053 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 CLEC4EQ9ULY5 219 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 NDRG2Q9UN36 371 aaKnown RBP16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 AP4E1Q9UPM8 1137 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 DUSP10Q9Y6W6 482 aa16.97■□□□□ 0.31
PACSIN3-210ENST00000533686 FAM72CH0Y354 149 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 DLL1O00548 723 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 BUB1BO60566 1050 aaPredicted RBP16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 SRGAP2O75044 1071 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 LRIG2O94898 1065 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 CCDC175P0C221 793 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 CHRNB1P11230 501 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 TCF4P15884 667 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 HOXC13P31276 330 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 TNFRSF4P43489 277 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 OXCT1P55809 520 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 FZD5Q13467 585 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 CCINQ13939 588 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 LRRC32Q14392 662 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 FAM72AQ5TYM5 149 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 DAB2IPQ5VWQ8 1189 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 CWF19L1Q69YN2 538 aaKnown RBP16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 FAM72DQ6L9T8 149 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 C11orf63Q6NUN7 778 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 ZNF662Q6ZS27 426 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 KIAA0907Q7Z7F0 614 aaPredicted RBP16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 FAM72BQ86X60 149 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 CCAR2Q8N163 923 aaKnown RBP16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 TERB1Q8NA31 727 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 FLCNQ8NFG4 579 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 TPCN2Q8NHX9 752 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 CCDC26Q8TAB7 109 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 CLDN23Q96B33 292 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 TBC1D31Q96DN5 1066 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 LMLNQ96KR4 655 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 EPAS1Q99814 870 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 C1QTNF1Q9BXJ1 281 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 MAGEB5Q9BZ81 275 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 TSGA10Q9BZW7 698 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 FOXQ1Q9C009 403 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 ZYG11BQ9C0D3 744 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 DHX35Q9H5Z1 703 aaKnown RBP16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 SIT1Q9Y3P8 196 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 MTF2Q9Y483 593 aaPredicted RBP16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 MYOFQ9NZM1 2061 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 TRIOO75962 3097 aa16.96■□□□□ 0.31
PACSIN3-210ENST00000533686 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 TBC1D3BA6NDS4 549 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 TMEM110-MUSTN1A8MSY1 372 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 H0Y626 953 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 TRIM24O15164 1050 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 EGFP01133 1207 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 KRT7P08729 469 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 RARAP10276 462 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 RHOQP17081 205 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 AOC1P19801 751 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 HLA-FP30511 346 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 SSR1P43307 286 aaKnown RBP16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 MAGEA9P43362 315 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 KDSRQ06136 332 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 MESP2Q0VG99 397 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 ZNF177Q13360 481 aaPredicted RBP16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 CDH18Q13634 790 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 DPYSL2Q16555 572 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 IFI16Q16666 785 aaKnown RBP16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 CA9Q16790 459 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 ALFQ53S48 1182 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 LRRC38Q5VT99 294 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 ASTLQ6HA08 431 aaPredicted RBP16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 POLNQ7Z5Q5 900 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 ANKS1BQ7Z6G8 1248 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 CPNE8Q86YQ8 564 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 CCDC105Q8IYK2 499 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 PYROXD2Q8N2H3 581 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 CARNMT1Q8N4J0 409 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 RNF10Q8N5U6 811 aaKnown RBP16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 WFIKKN2Q8TEU8 576 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 LMAN1LQ9HAT1 526 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 C11orf16Q9NQ32 467 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 GPATCH2LQ9NWQ4 482 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 KIAA1522Q9P206 1035 aaPredicted RBP16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 NEU3Q9UQ49 428 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 TBC1D30Q9Y2I9 924 aa16.95■□□□□ 0.3
PACSIN3-210ENST00000533686 ALG6Q9Y672 507 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms